Help needing to find e-mail address of SF user (Was: Packaging HTQC for Debian - one test failure)
Hi,
the address of the author I was finding on the web bounced. I have no
SF account any more and thus I wonder whether somebody could possibly
find the e-mail address of
http://sourceforge.net/u/jiandingzhe/profile/
Thanks
Andreas.
On Tue, Jun 23, 2015 at 10:34:48AM +0200, Andreas Tille wrote:
> Hi,
>
> I'm writing you on behalf of the Debian Med team that has the objective
> to package all Free Software relevant in the fields of medicine and
> biology for official Debian. We have set your program HTQC on our todo
> list and have started with the packaging[1].
>
> Since it is best practice to run the test suite of any software we are
> packaging if available I did so and stumbled upon one failure out of 29
> tests:
>
> ...
> 20/29 Test #20: ht_rename ........................ Passed 0.01 sec
> Start 21: ht_overlap
> 21/29 Test #21: ht_overlap .......................***Failed 0.01 sec
> ok 1 - ../src/ht2-overlap -q -i /tmp/buildd/htqc-1.92.1/t/test1.fastq.gz /tmp/buildd/htqc-1.92.1/t/test2.fastq.gz -o ovlp -u novlp
> NOT ok 2 - text_file_eq("ovlp.fastq.gz", "/tmp/buildd/htqc-1.92.1/t" "/test_ovlp.fastq.gz")
> ok 3 - text_file_eq("novlp_1.fastq.gz", "/tmp/buildd/htqc-1.92.1/t" "/test_novlp_1.fastq.gz")
> ok 4 - text_file_eq("novlp_2.fastq.gz", "/tmp/buildd/htqc-1.92.1/t" "/test_novlp_2.fastq.gz")
> 4 tests, 1 failed
>
> Start 22: ht_filter
> 22/29 Test #22: ht_filter ........................ Passed 0.02 sec
> Start 23: ht_convert
> ...
>
>
> Are you aware about this problem and is there any fix or may be I was
> missing some program that might be called by this test? Any help would
> be welcome.
>
> Kind regards and thanks for providing HTQC as Free Software
>
> Andreas.
>
> [1] http://blends.debian.org/med/tasks/bio#htqc
>
> --
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>
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