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Re: Re: Update on Trinityrnaseq packaging


On Sat Feb 21 2015 at 10:05:36 PM "Steffen Möller" <steffen_moeller@gmx.de> wrote:
transdecoder went exceptionally smoothly.
Gesendet: Sonntag, 22. Februar 2015 um 03:33 Uhr
Von: "Steffen Möller" <steffen_moeller@gmx.de>
An: "Michael Crusoe" <michael.crusoe@gmail.com>
Cc: debian-med@lists.debian.org
Betreff: Aw: Re: Update on Trinityrnaseq packaging
I added an express-doc package and uploaded. That was OK, I hope.
@Andreas, I will address Transdecoder next.
Concerning the git repository I failed to get the upstream/1.5.1 branch - so I just decided to get the orig.tar.gz myself and work as if it was a good old subversion repository :)
Gesendet: Dienstag, 17. Februar 2015 um 04:46 Uhr
Von: "Michael Crusoe" <michael.crusoe@gmail.com>
An: debian-med@lists.debian.org
Betreff: Re: Update on Trinityrnaseq packaging
On Mon Feb 16 2015 at 11:09:37 AM Andreas Tille <andreas@an3as.eu> wrote:
Hi Michael,

On Mon, Feb 16, 2015 at 07:09:18AM +0000, Michael Crusoe wrote:
> To-do:
> dependencies needing review & uploading to Debian:
> - [ ] libjung-java
Ready for sponsoring
> - [ ] rsem
Has a dependency that I just packaged: r-bioc-ebseq (also needed for Trinity); of course that had its own dependency: r-cran-blockmodeling. Both are ready for sponsoring.
rsem itself needs manpages & testing
> - [ ] express
Ready for sponsoring
> - [ ] transdecoder

OK, just ping me if one or more are ready for sponsering.

> - [ ] jaligner

Just uploaded after some slight changes.

Thanks for your work



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