Re: ncbi-blast+ compilation issue

[olivier sallou <olivier.sallou@gmail.com>]

Seems that a "make all_r" does the job, I am trying compil with this (though docs still talks about makefile.flat...)

Anyway, as info, I found a compilation issue (warning map to an error). I made a patch for this but if you could inform upstream about the issue (it is the patch fix_compilation on src/util/regexp/pcretest.c.

printf(prompt) needs to be changed in printf("%s",prompt) line 253.

Olivier

Le Sat Nov 22 2014 at 3:40:06 PM, olivier sallou <olivier.sallou@gmail.com> a écrit :

Hi Aaron,

I am updating package for ncbi-blast+ 2.2.30 but I face a compilation issue.

d/rules was (and is) specifying the --with-flat-makefile option for configure to generate a Makefile.flat as per specified in documentation [0]. Then make is executed against this makefile.flat file.

However, with this release, no Makefile.flat file is generated in BUILD/build directory.

If you want to test, I have updated in svn the patches etc... to match this release.

[0] http://www.ncbi.nlm.nih.gov/toolkit/doc/book/ch_config

Thanks

Olivier