Re: Flexbar - SeqAn and TBB library
On 25/03/13 07:53, Andreas Tille wrote:
> Hi Johannes,
>
> many thanks for the status updated. We will see in what status
> seqan will be once Debian Wheezy is released and whether it might
> make sense to package a snapshot from SVN.
Hi, Andreas.
Should we update our "Flexbar" package for Debian-Med using Johannes
latest 2.33 upstream source release?
Bye,
Tony.
> On Sun, Mar 24, 2013 at 03:27:44PM +0100, Johannes Röhr wrote:
>> Hi Tony,
>>
>> concerning the tbb header files that I included in the last source
>> download of the Flexbar 2.32 release, I recognized that it makes no
>> sense to include them without corresponding tbb binary files in the
>> lib folder, because this easily leads to inconsitencies of tbb
>> versions. Therefore, I exclude the tbb headers in the include
>> folder of source releases from now on, which I already did for the
>> new 2.33 release.
>>
>> By the way, I also decided to completely remove modifications from
>> the SeqAn header files in the end. I now use the svn externals
>> property to directly refer to the SeqAn repository to the same
>> revision as used before. The removal of modifications slightly
>> changes the current behaviour of the command line parser, but is a
>> step towards the direct usage of SeqAn. As the situation that the
>> used SeqAn version is newer than the current release in Debian has
>> not changed, direct usage of the Debian SeqAn package still has to
>> wait. Once the upcoming release of SeqAn is out, I will adjust
>> Flexbar to it if needed and inform you as discussed.
>>
>> Best regards Johannes
>
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