Re: Anyone using latest micromanager ?
As per debian-java this means I need a newer clojure (clojure/data.json) :
https://lists.debian.org/debian-java/2012/09/msg00020.html
HTH
On Mon, Jul 30, 2012 at 4:44 PM, Johan Henriksson <mahogny@areta.org> wrote:
> it rings a bell; I think it happen when it was not stored in a directory
> called trunk?
>
> /Johan
>
> On Fri, Jul 27, 2012 at 10:56 PM, Mathieu Malaterre
> <mathieu.malaterre@gmail.com> wrote:
>>
>> Hi,
>>
>> I am trying to compile micromanager 1.4.10/1.4.11 but it keeps on
>> failing with:
>>
>>
>> Compiling org.micromanager.browser.plugin to DataBrowser/classes
>> Exception in thread "main" java.io.FileNotFoundException: Could not
>> locate clojure/data/json__init.class or clojure/data/json.clj on
>> classpath: , compiling:(core.clj:15)
>> at clojure.lang.Compiler$InvokeExpr.eval(Compiler.java:3390)
>> at clojure.lang.Compiler.compile1(Compiler.java:7038)
>> at clojure.lang.Compiler.compile1(Compiler.java:7028)
>> at clojure.lang.Compiler.compile(Compiler.java:7100)
>> at clojure.lang.RT.compile(RT.java:387)
>> at clojure.lang.RT.load(RT.java:427)
>> at clojure.lang.RT.load(RT.java:400)
>> at clojure.core$load$fn__4890.invoke(core.clj:5415)
>> at clojure.core$load.doInvoke(core.clj:5414)
>> at clojure.lang.RestFn.invoke(RestFn.java:408)
>> at clojure.core$load_one.invoke(core.clj:5227)
>> at clojure.core$load_lib.doInvoke(core.clj:5264)
>> at clojure.lang.RestFn.applyTo(RestFn.java:142)
>> at clojure.core$apply.invoke(core.clj:603)
>> at clojure.core$load_libs.doInvoke(core.clj:5298)
>> at clojure.lang.RestFn.applyTo(RestFn.java:137)
>> at clojure.core$apply.invoke(core.clj:605)
>> at clojure.core$use.doInvoke(core.clj:5392)
>> at clojure.lang.RestFn.invoke(RestFn.java:408)
>> at
>> org.micromanager.browser.plugin$loading__4784__auto__.invoke(plugin.clj:16)
>> at clojure.lang.AFn.applyToHelper(AFn.java:159)
>> at clojure.lang.AFn.applyTo(AFn.java:151)
>> at clojure.lang.Compiler$InvokeExpr.eval(Compiler.java:3385)
>> at clojure.lang.Compiler.compile1(Compiler.java:7038)
>> at clojure.lang.Compiler.compile1(Compiler.java:7028)
>> at clojure.lang.Compiler.compile(Compiler.java:7100)
>> at clojure.lang.RT.compile(RT.java:387)
>> at clojure.lang.RT.load(RT.java:427)
>> at clojure.lang.RT.load(RT.java:400)
>> at clojure.core$load$fn__4890.invoke(core.clj:5415)
>> at clojure.core$load.doInvoke(core.clj:5414)
>> at clojure.lang.RestFn.invoke(RestFn.java:408)
>> at clojure.core$load_one.invoke(core.clj:5227)
>> at clojure.core$compile$fn__4895.invoke(core.clj:5426)
>> at clojure.core$compile.invoke(core.clj:5425)
>> at clojure.lang.Var.invoke(Var.java:415)
>> at clojure.lang.Compile.main(Compile.java:81)
>> Caused by: java.io.FileNotFoundException: Could not locate
>> clojure/data/json__init.class or clojure/data/json.clj on classpath:
>> at clojure.lang.RT.load(RT.java:432)
>> at clojure.lang.RT.load(RT.java:400)
>> at clojure.core$load$fn__4890.invoke(core.clj:5415)
>> at clojure.core$load.doInvoke(core.clj:5414)
>> at clojure.lang.RestFn.invoke(RestFn.java:408)
>> at clojure.core$load_one.invoke(core.clj:5227)
>> at clojure.core$load_lib.doInvoke(core.clj:5264)
>> at clojure.lang.RestFn.applyTo(RestFn.java:142)
>> at clojure.core$apply.invoke(core.clj:603)
>> at clojure.core$load_libs.doInvoke(core.clj:5298)
>> at clojure.lang.RestFn.applyTo(RestFn.java:137)
>> at clojure.core$apply.invoke(core.clj:605)
>> at clojure.core$use.doInvoke(core.clj:5392)
>> at clojure.lang.RestFn.invoke(RestFn.java:457)
>> at
>> org.micromanager.browser.core$loading__4784__auto__.invoke(core.clj:15)
>> at clojure.lang.AFn.applyToHelper(AFn.java:159)
>> at clojure.lang.AFn.applyTo(AFn.java:151)
>> at clojure.lang.Compiler$InvokeExpr.eval(Compiler.java:3385)
>> ... 36 more
>> make[2]: *** [DataBrowser.jar] Error 1
>> make[2]: Leaving directory
>>
>> `/home/mathieu/debian/debian-med/trunk/packages/micromanager/trunk/micromanager-1.4.11/plugins'
>> make[1]: *** [all-recursive] Error 1
>> make[1]: Leaving directory
>>
>> `/home/mathieu/debian/debian-med/trunk/packages/micromanager/trunk/micromanager-1.4.11'
>> dh_auto_build: make -j1 returned exit code 2
>> make: *** [build] Error 2
>>
>>
>> Anyone seen this before ?
>>
>> Thanks
>> --
>> Mathieu
>>
>>
>> --
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>>
>
>
>
> --
> --
> -----------------------------------------------------------
> Johan Henriksson, PhD
> Karolinska Institutet
> Ecobima AB - Custom solutions for life sciences
> http://www.ecobima.se http://mahogny.areta.org http://www.endrov.net
>
>
--
Mathieu
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