Re: status on picard-tools and issue with libsnappy-java

To: debian-med@lists.debian.org
Subject: Re: status on picard-tools and issue with libsnappy-java
From: Charles Plessy <plessy@debian.org>
Date: Mon, 13 Aug 2012 20:51:14 +0900
Message-id: <[🔎] 20120813115114.GE4132@falafel.plessy.net>
In-reply-to: <[🔎] 20120813113543.GE10616@an3as.eu>
References: <5023C8BF.7070600@broadinstitute.org> <[🔎] 5028AC76.80207@codeless.fr> <[🔎] 20120813090803.GB10616@an3as.eu> <[🔎] 5028D734.6090502@codeless.fr> <[🔎] 20120813110722.GD4132@falafel.plessy.net> <[🔎] 20120813113543.GE10616@an3as.eu>

Le Mon, Aug 13, 2012 at 01:35:43PM +0200, Andreas Tille a écrit :
> 
> Could you please exlpain again the advantage of having libsnappy for the
> picard-tools user?

It accelerates some operations by compressing temporary data on the fly.  The
upstream website mentions a time reduction of 25 %.

http://sourceforge.net/apps/mediawiki/picard/index.php?title=Using_Snappy_in_Picard

Cheers,

-- 
Charles

Reply to:

References:
- status on picard-tools and issue with libsnappy-java
  - From: "olivier.sallou@codeless.fr" <olivier.sallou@codeless.fr>
- Re: status on picard-tools and issue with libsnappy-java
  - From: Andreas Tille <andreas@an3as.eu>
- Re: status on picard-tools and issue with libsnappy-java
  - From: "olivier.sallou@codeless.fr" <olivier.sallou@codeless.fr>
- Re: status on picard-tools and issue with libsnappy-java
  - From: Charles Plessy <plessy@debian.org>
- Re: status on picard-tools and issue with libsnappy-java
  - From: Andreas Tille <andreas@an3as.eu>

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