dicomscope package dependency issue?

To: Debian Med Project List <debian-med@lists.debian.org>
Subject: dicomscope package dependency issue?
From: vid <vid@svaksha.com>
Date: Mon, 18 Jun 2012 12:30:35 +0000
Message-id: <[🔎] CAN9ztG8sh51-cbY=aZ+WHKYPyFgTOYcM4YKTtXipnT+XvWGcxQ@mail.gmail.com>

Hello,

I installed the dicomscope package via aptitude and trying to view
.dcm images results in the application exiting abruptly. Using the cli
mode gives an error message (appended below) that seems like a
dependency issue but its not very clear if its a java dependency issue
or a memory issue or some other packaging-related bug. Thought I
should ask for feedback before filing a bug report. TIA.

<error message>
starting DICOMscope
please wait...
*** glibc detected *** /usr/bin/java: free(): invalid next size
(fast): 0x09a9d650 ***
======= Backtrace: =========
/lib/libc.so.6(+0x6c0c1)[0x7630c1]
/lib/libc.so.6(+0x6d930)[0x764930]
/lib/libc.so.6(cfree+0x6d)[0x767a1d]
/usr/lib/libstdc++.so.6(_ZdlPv+0x21)[0x3943441]
/usr/lib/libstdc++.so.6(_ZdaPv+0x1d)[0x394349d]
/usr/lib/libdcmdata.so.1(_ZN10DcmElementD2Ev+0x34)[0xa18e24]
/usr/lib/libdcmdata.so.1(_ZN13DcmByteStringD2Ev+0x28)[0xa34318]
/usr/lib/libdcmdata.so.1(_ZN19DcmUniqueIdentifierD1Ev+0x28)[0xa41e18]
/usr/lib/libdcmpstat.so.1(_ZN20DcmPresentationStateD2Ev+0x2b4)[0x6fbf184]
/usr/lib/libdcmpstat.so.1(_ZN19DVPresentationStateD0Ev+0x70)[0x6f2ff60]
/usr/lib/libdcmpstat.so.1(_ZN11DVInterface9loadImageEPKc+0x32d)[0x6f4c28d]
/usr/lib/libjInterface.so(Java_J2Ci_jDVInterface_loadImage__Ljava_lang_String_2+0x61)[0x335941]
[0xb470a62a]
[0xb4703005]
[0xb4702ee1]
[0xb47035e9]
[0xb4702ee1]
[0xb47033bd]
[0xb47033bd]
[0xb4702ee1]
[0xb47033bd]
[0xb4702ee1]
[0xb47033bd]
[0xb47033bd]
[0xb47033bd]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb470310d]
[0xb470310d]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb4702ee1]
[0xb4703047]
[0xb47003e6]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server/libjvm.so(+0x387952)[0x113c952]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server/libjvm.so(+0x518df9)[0x12cddf9]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server/libjvm.so(+0x38688f)[0x113b88f]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server/libjvm.so(JVM_DoPrivileged+0x21d)[0x118a9cd]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libjava.so(Java_java_security_AccessController_doPrivileged__Ljava_security_PrivilegedAction_2Ljava_security_AccessControlContext_2+0x3a)[0x22dd6a]
[0xb470a62a]
[0xb4703047]
[0xb4703047]
[0xb4703523]
[0xb4703047]
[0xb47003e6]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server/libjvm.so(+0x387952)[0x113c952]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server/libjvm.so(+0x518df9)[0x12cddf9]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server/libjvm.so(+0x38688f)[0x113b88f]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/server/libjvm.so(JVM_DoPrivileged+0x21d)[0x118a9cd]
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libjava.so(Java_java_security_AccessController_doPrivileged__Ljava_security_PrivilegedAction_2Ljava_security_AccessControlContext_2+0x3a)[0x22dd6a]
[0xb470a62a]
[0xb4703047]
[0xb4703523]
[0xb4702ee1]
[0xb470310d]
======= Memory map: ========
00110000-00117000 r-xp 00000000 08:07 2228405    /lib/librt-2.12.1.so
00117000-00118000 r--p 00006000 08:07 2228405    /lib/librt-2.12.1.so
00118000-00119000 rw-p 00007000 08:07 2228405    /lib/librt-2.12.1.so
00119000-0012c000 r-xp 00000000 08:07 2228549    /lib/libnsl-2.12.1.so
0012c000-0012d000 r--p 00012000 08:07 2228549    /lib/libnsl-2.12.1.so
0012d000-0012e000 rw-p 00013000 08:07 2228549    /lib/libnsl-2.12.1.so
0012e000-00130000 rw-p 00000000 00:00 0
00130000-00134000 r-xp 00000000 08:07 10356367   /usr/lib/libXtst.so.6.1.0
00134000-00135000 r--p 00003000 08:07 10356367   /usr/lib/libXtst.so.6.1.0
00135000-00136000 rw-p 00004000 08:07 10356367   /usr/lib/libXtst.so.6.1.0
00136000-0013f000 r-xp 00000000 08:07 2228547    /lib/libnss_nis-2.12.1.so
0013f000-00140000 r--p 00008000 08:07 2228547    /lib/libnss_nis-2.12.1.so
00140000-00141000 rw-p 00009000 08:07 2228547    /lib/libnss_nis-2.12.1.so
00141000-00184000 r-xp 00000000 08:07 11276280
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/xawt/libmawt.so
00184000-00185000 r--p 00042000 08:07 11276280
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/xawt/libmawt.so
00185000-00187000 rw-p 00043000 08:07 11276280
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/xawt/libmawt.so
00187000-00188000 rw-p 00000000 00:00 0
00188000-0018a000 r-xp 00000000 08:07 10356326   /usr/lib/libXau.so.6.0.0
0018a000-0018b000 r--p 00001000 08:07 10356326   /usr/lib/libXau.so.6.0.0
0018b000-0018c000 rw-p 00002000 08:07 10356326   /usr/lib/libXau.so.6.0.0
0018d000-001a0000 r-xp 00000000 08:07 2228422    /lib/libz.so.1.2.3.4
001a0000-001a1000 r--p 00012000 08:07 2228422    /lib/libz.so.1.2.3.4
001a1000-001a2000 rw-p 00013000 08:07 2228422    /lib/libz.so.1.2.3.4
001a2000-001aa000 r-xp 00000000 08:07 10356361   /usr/lib/libXrender.so.1.3.0
001aa000-001ab000 r--p 00007000 08:07 10356361   /usr/lib/libXrender.so.1.3.0
001ab000-001ac000 rw-p 00008000 08:07 10356361   /usr/lib/libXrender.so.1.3.0
001ac000-001b8000 r-xp 00000000 08:07 10356347   /usr/lib/libXi.so.6.1.0
001b8000-001b9000 r--p 0000b000 08:07 10356347   /usr/lib/libXi.so.6.1.0
001b9000-001ba000 rw-p 0000c000 08:07 10356347   /usr/lib/libXi.so.6.1.0
001ba000-001d2000 r-xp 00000000 08:07 10357373   /usr/lib/libxcb.so.1.1.0
001d2000-001d3000 r--p 00017000 08:07 10357373   /usr/lib/libxcb.so.1.1.0
001d3000-001d4000 rw-p 00018000 08:07 10357373   /usr/lib/libxcb.so.1.1.0
001d4000-001ff000 r-xp 00000000 08:07 10355304   /usr/lib/libdcmjpeg.so.1.0.0
001ff000-00200000 r--p 0002a000 08:07 10355304   /usr/lib/libdcmjpeg.so.1.0.0
00200000-00201000 rw-p 0002b000 08:07 10355304   /usr/lib/libdcmjpeg.so.1.0.0
00201000-00209000 r-xp 00000000 08:07 10356333   /usr/lib/libXcursor.so.1.0.2
00209000-0020a000 r--p 00007000 08:07 10356333   /usr/lib/libXcursor.so.1.0.2
0020a000-0020b000 rw-p 00008000 08:07 10356333   /usr/lib/libXcursor.so.1.0.2
0020b000-00211000 r-xp 00000000 08:07 10486854
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libzip.so
00211000-00212000 r--p 00005000 08:07 10486854
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libzip.so
00212000-00213000 rw-p 00006000 08:07 10486854
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libzip.so
00224000-00246000 r-xp 00000000 08:07 10486849
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libjava.so
00246000-00247000 r--p 00021000 08:07 10486849
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libjava.so
00247000-00249000 rw-p 00022000 08:07 10486849
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libjava.so
00258000-0025b000 r-xp 00000000 08:07 11275885
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/jli/libjli.so
0025b000-0025c000 r--p 00002000 08:07 11275885
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/jli/libjli.so
0025c000-0025d000 rw-p 00003000 08:07 11275885
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/jli/libjli.so
0025d000-002e0000 r-xp 00000000 08:07 10486852
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libawt.so
002e0000-002e1000 r--p 00082000 08:07 10486852
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libawt.so
002e1000-002e7000 rw-p 00083000 08:07 10486852
/usr/lib/jvm/java-6-openjdk/jre/lib/i386/libawt.so
002e7000-0030c000 rw-p 00000000 00:00 0
0030c000-00351000 r-xp 00000000 08:07 10357963
/usr/lib/libjInterface.soAborted

</error message>
-- 
Regards,
Vid
॥ http://svaksha.com ॥

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- Re: dicomscope package dependency issue?
  - From: Mathieu Malaterre <mathieu.malaterre@gmail.com>
- [solved] Re: dicomscope package dependency issue?
  - From: vid <vid@svaksha.com>

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