Re: ITP: ssake -- assembling millions of very short DNA sequences (fwd)
On Mon, 24 Nov 2008, Charles Plessy wrote:
thanks a lot for the package. It comes right in time with the explosion of
short-read sequencing in biology. I would suggest to ship the extra scripts in
a directory like /usr/share/ssake or /usr/doc/ssake/scripts, with the exception
of TQS, that looks like being of general interest and could go in /usr/bin.
OK, so I would copy TQS.py to /usr/bin/tqs and write a manpage tqs.1.
The scripts makeFastaFileFromScaffolds.pl and nLength.pl might go to
/usr/share/ssake. But I do not think that we need the old versions of
ssake which are shipped in the tarball. Or did I missed something?