Re: ITP: ssake -- assembling millions of very short DNA sequences (fwd)

[Charles Plessy <plessy@debian.org>]

Le Mon, Nov 24, 2008 at 02:51:58PM +0100, Andreas Tille a écrit :
> Package: wnpp
> Severity: wishlist
> Owner: Andreas Tille <tillea@rki.de>
>
> * Package name    : ssake
>   Version         : 3.2.1
>   Upstream Author : Rene Warren <rwarrens * bcgsc.ca>
> * URL             : http://www.bcgsc.ca/platform/bioinfo/software/ssake
> * License         : GPL 2+
>   Programming Lang: Perl
>   Description     : assembling millions of very short DNA sequences
>  SSAKE is a genomics application for assembling millions of very short
>  DNA sequences.

Hi Andreas,

thanks a lot for the package. It comes right in time with the explosion of
short-read sequencing in biology. I would suggest to ship the extra scripts in
a directory like /usr/share/ssake or /usr/doc/ssake/scripts, with the exception
of TQS, that looks like being of general interest and could go in /usr/bin.

Have a nice day,

-- 
Charles Plessy
Debian Med packaging team,
Tsurumi, Kanagawa, Japan