RFS: primer3

[Charles Plessy <charles-debian-nospam@plessy.org>]

Dear all,

There is a new upstream release of primer3 that fixes a bug reported in
Ubuntu (https://bugs.launchpad.net/ubuntu/+source/primer3/+bug/191053).

There has been a lot of housekeeping work on this package since last
upload. The biggest changes are that the package now uses CDBS, and that
the tests are enabled for all arches (they can be a bit annoying for
causual building, and you can skip them by setting
DEB_BUILD_OPTIONS=notest).

Here is the changelog:

primer3 (1.1.3-1) unstable; urgency=low

  [ Charles Plessy ]
  * New upstream version:
    - 1.1.3: Corrected static buffer overflow errors in
      boulder_print_pairs() and boulder_print_oligos() in primer3_main.c.
    - 1.1.2: Updates to dpal.c so that no error forces an exit.
      Adpatation in primer3_main.c and ntdpal_main.c to
        updated error handling in dpal().
      Arranged for primer3_main.c align() to check for
        and circumvent local alignments to "targets" < 3 nucleotides
        long, and added tests for this condition.
      Comment and code readability updates in dpal.h and dpal.c
  * Moved the Homepage: field out from the package's description.
  * debian/control: updated Steffen's email address.
  * debian/*.1.xml: corrected the headers of the sources of manpages.
  * debian/rules: converted to CDBS.

  [ David Paleino ]
  * debian/ntdpal.1, debian/primer3_core.1 and debian/oligotm.1
    added - manpages are statically built now
  * debian/control:
    - B-D updated
    - added myself to Uploaders
  * Updated to Standards-Version 3.7.3 (no changes needed)

 -- Charles Plessy <charles-debian-nospam@plessy.org>  Mon, 25 Feb 2008 16:31:58 +0900



-- 
Charles Plessy
http://charles.plessy.org
Wakō, Saitama, Japan