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Bug#205370: ITP: T-Coffee -- [Biology] Multiple local sequence alignment (fwd)



Hi,

I'd love if someone could sponsor this package which is a target for
med-bio-contrib.

This would take some workload from me.  Regarding to workload I have to
admit that I did not mentioned to get the Debian-Med news items on the
web pages up to date which are becoming "olds" more and more. :-(

Kind regards

        Andreas.

---------- Forwarded message ----------
Date: Thu, 14 Aug 2003 10:53:13 +0200
From: Steffen Moeller <moeller@pzr.uni-rostock.de>
To: Debian Bug Tracking System <submit@bugs.debian.org>
Subject: Bug#205370: ITP: T-Coffee -- [Biology] Multiple local sequence
    alignment
Resent-Date: Thu, 14 Aug 2003 09:33:06 UTC
Resent-From: Steffen Moeller <moeller@pzr.uni-rostock.de>
Resent-To: debian-bugs-dist@lists.debian.org
Resent-cc: debian-devel@lists.debian.org,
           wnpp@debian.org

Package: wnpp
Version: N/A; reported 2003-08-14
Severity: wishlist

* Package name    : T-Coffee
  Version         : 1.3.7
  Upstream Author : Cedric Notredame <cedric.notredame@europe.com>
* URL             : http://igs-server.cnrs-mrs.fr/~cnotred/Projects_home_page/t_coffee_home_page.html
* License         : non-free
  Description     : [Biology] Multiple local sequence alignment

Taken from the T-Coffee documentation:

T-Coffee is a multiple sequence alignment program. Multiple sequence
alignment programs are meant to align a set of sequences previously
gathered using other programs such as blast, fasta, sw ...

The main characteristic of T-Coffee is that it will allow you to combine
results obtained with several alignment methods. For instance if you
have an alignment coming from ClustalW, an other alignment coming from
Dialign, and a structural alignment of some of your sequences, T-Coffee
will combine all that information and produce a new multiple sequence
having the best agreement with all these methods.



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