Dear Debian maintainer, On Thursday, December 29, 2011, I notified you of the beginning of a review process concerning debconf templates for biomaj. The debian-l10n-english contributors have now reviewed these templates, and the final proposed changes are attached to this update to the original bug report. Please review the suggested changes, and if you have any objections, let me know in the next 3 days. However, please try to avoid uploading biomaj with these changes right now. The second phase of this process will begin on Sunday, January 15, 2012, when I will coordinate updates to translations of debconf templates. The existing translators will be notified of the changes: they will receive an updated PO file for their language. Simultaneously, a general call for new translations will be sent to the debian-i18n mailing list. Both these calls for translations will request updates to be sent as individual bug reports. That will probably trigger a lot of bug reports against your package, but these should be easier to deal with. The call for translation updates and new translations will run until about Sunday, February 05, 2012. Please avoid uploading a package with fixed or changed debconf templates and/or translation updates in the meantime. Of course, other changes are safe. Please note that this is an approximative delay, which depends on my own availability to process this work and is influenced by the fact that I simultaneously work on many packages. Around Monday, February 06, 2012, I will contact you again and will send a final patch summarizing all the updates (changes to debconf templates, updates to debconf translations and new debconf translations). Again, thanks for your attention and cooperation. --
# These templates have been reviewed by the debian-l10n-english # team # # If modifications/additions/rewording are needed, please ask # debian-l10n-english@lists.debian.org for advice. # # Even minor modifications require translation updates and such # changes should be coordinated with translators and reviewers. Template: biomaj/mysql Type: boolean _Description: Configure MySQL connection now? Once the MySQL database for BioMAJ has been created and configured, it can populate itself automatically instead of needing to be updated manually. . Please specify whether the database connection should be configured now. Template: biomaj/mysql_host Type: string _Description: MySQL server: Please enter the hostname or IP address of the MySQL server you want to use. Template: biomaj/mysql_login Type: string _Description: MySQL login for BioMAJ database: Please enter the login to use when connecting to the MySQL database server to access the biomaj_log database. Template: biomaj/mysql_passwd Type: password _Description: MySQL password for BioMAJ database: Please enter the password to use when connecting to the MySQL database server to access the biomaj_log database.
Source: biomaj
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Olivier Sallou <olivier.sallou@irisa.fr>
DM-Upload-Allowed: yes
Vcs-Svn: svn://svn.debian.org/svn/debian-med/trunk/packages/biomaj/trunk/
Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/biomaj/trunk/?rev=0&sc=0
Homepage: http://biomaj.genouest.org
Build-Depends: debhelper (>= 7.1)
Build-Depends-Indep: debconf, po-debconf, openjdk-6-jdk|default-jdk|sun-java6-jdk, ant, libhsqldb-java, ant-contrib,
liblog4j1.2-java, libcommons-net2-java, libcommons-dbcp-java, libgnumail-java, libcommons-pool-java,
libgnujaf-java, libjgoodies-forms-java, liboro-java, libregexp-java,
libjcommon-java, libjsch-java, libjdom1-java, junit4, libsaxonb-java, libjdepend-java,
javahelper (>=0.25), libcommons-cli-java, libcommons-codec-java, libcommons-httpclient-java, libcommons-logging-java,
libjets3t-java
Standards-Version: 3.9.2
Package: biomaj
Architecture: all
Depends: ${misc:Depends}, ${java:Depends},
openjdk-6-jdk|default-jdk|sun-java6-jdk, ant, libmysql-java, debconf,
libhsqldb-java,ant-contrib,liblog4j1.2-java,libcommons-net2-java (>= 2.2),libcommons-dbcp-java (>= 1.2),
libgnumail-java, libcommons-pool-java (>= 1.5), libgnujaf-java, libjgoodies-forms-java (>= 1.2),
liboro-java (>= 2.0),libregexp-java (>= 1.4),libjcommon-java (>= 1.0),libjsch-java (>= 0.1.42),
libjdom1-java (>= 1.1),junit4,libsaxonb-java (>= 0.9), libcommons-cli-java, libcommons-codec-java,
libcommons-httpclient-java, libcommons-logging-java,libjets3t-java, perl,
mysql-server
Suggests: ncbi-tools-bin, blast2
Description: biological data-bank updater
BioMAJ downloads remote data banks, checks their status and applies
transformation workflows, with consistent state, to provide ready-to-use
data for biologists and bioinformaticians. For example, it can transform
original FASTA files into BLAST indexes. It is very flexible and its
post-processing facilities can be extended very easily.
Package: biomaj-properties
Architecture: all
Depends: ${misc:Depends}
Description: biological data-bank updater - example properties files
This package contains a set of data bank properties files that can be
used as examples for BioMAJ. It contains descriptions for many existing
data banks with or without workflows to transform data. Some files may
require additional programs (such as BLAST) for post-processing.
--- biomaj.old/debian/templates 2011-12-27 22:20:05.845944392 +0100
+++ biomaj/debian/templates 2012-01-12 06:55:06.649594493 +0100
@@ -1,19 +1,35 @@
-Template: biomaj/jdk_home
-Type: string
-_Description: The JDK home directory:
+# These templates have been reviewed by the debian-l10n-english
+# team
+#
+# If modifications/additions/rewording are needed, please ask
+# debian-l10n-english@lists.debian.org for advice.
+#
+# Even minor modifications require translation updates and such
+# changes should be coordinated with translators and reviewers.
Template: biomaj/mysql
Type: boolean
-_Description: Want to configure MySQL connection now ?
+_Description: Configure MySQL connection now?
+ Once the MySQL database for BioMAJ has been created and configured, it
+ can populate itself automatically instead of needing to be updated
+ manually.
+ .
+ Please specify whether the database connection should be configured now.
Template: biomaj/mysql_host
Type: string
-_Description: Enter MySQL server address:
+_Description: MySQL server:
+ Please enter the hostname or IP address of the
+ MySQL server you want to use.
Template: biomaj/mysql_login
Type: string
-_Description: User login for biomaj database:
+_Description: MySQL login for BioMAJ database:
+ Please enter the login to use when connecting to the MySQL database
+ server to access the biomaj_log database.
Template: biomaj/mysql_passwd
Type: password
-_Description: User password for biomaj database:
+_Description: MySQL password for BioMAJ database:
+ Please enter the password to use when connecting to the MySQL database
+ server to access the biomaj_log database.
--- biomaj.old/debian/control 2011-12-27 22:20:05.845944392 +0100
+++ biomaj/debian/control 2011-12-29 22:10:51.587244862 +0100
@@ -27,17 +27,18 @@
libcommons-httpclient-java, libcommons-logging-java,libjets3t-java, perl,
mysql-server
Suggests: ncbi-tools-bin, blast2
-Description: Biological banks updater
- BioMAJ downloads remote data banks, check their status and apply transformation
- workflows, with consistent state,to provide ready-to-use data to biologists and
- bioinformaticians. For example, it can transform original fasta files to blast
- indexes. It is very flexible and post-processes can be extended very easily.
+Description: biological data-bank updater
+ BioMAJ downloads remote data banks, checks their status and applies
+ transformation workflows, with consistent state, to provide ready-to-use
+ data for biologists and bioinformaticians. For example, it can transform
+ original FASTA files into BLAST indexes. It is very flexible and its
+ post-processing facilities can be extended very easily.
Package: biomaj-properties
Architecture: all
Depends: ${misc:Depends}
-Description: bank properties file examples
- This package contains a set of bank properties that can be used as
- examples for biomaj. It contains many existing banks descriptions
- with or without workflows to transform data. Some files may required
- additional programs for post processes (blast..).
+Description: biological data-bank updater - example properties files
+ This package contains a set of data bank properties files that can be
+ used as examples for BioMAJ. It contains descriptions for many existing
+ data banks with or without workflows to transform data. Some files may
+ require additional programs (such as BLAST) for post-processing.
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