debian-med Jul 2022 by thread
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Re: milib moved to gradle build system - help needed
tony mancill
Re: milib moved to gradle build system - help needed
Pierre Gruet
Added autopkgtest for biomaj3-cli,gdcm
Mohd Bilal
Re: Added autopkgtest for biomaj3-cli,gdcm
Mathieu Malaterre
Re: Added autopkgtest for biomaj3-cli,gdcm
Nilesh Patra
Re: Added autopkgtest for biomaj3-cli,gdcm
Mohd Bilal
Re: Added autopkgtest for biomaj3-cli,gdcm
Nilesh Patra
Bug#1014344: ITP: gatk-bwamem -- interface to call Heng Li's bwa mem aligner from Java code
Pierre Gruet
Bug#1014344: marked as done (ITP: gatk-bwamem -- interface to call Heng Li's bwa mem aligner from Java code)
Debian Bug Tracking System
Re: We should do an update of all qiime2 modules as soon as possible (Was: Bug#1014100: qiime: autopkgtest needs update for new version of python-decorator)
Nilesh Patra
ITP: abpoa -- adaptive banded Partial Order Alignment
Étienne Mollier
Bug#1014695: RM: nanopolish [s390x] -- ROM; nanopolish transitively depends on streamvbyte which does not build on s390x
Nilesh Patra
Re: suggesting dnarrange and lamassemble
Nilesh Patra
Re: suggesting dnarrange and lamassemble
Frith, Martin
Re: suggesting dnarrange and lamassemble
Nilesh Patra
Re: suggesting dnarrange and lamassemble
Frith, Martin
Re: suggesting dnarrange and lamassemble
Nilesh Patra
Re: suggesting dnarrange and lamassemble
Frith, Martin
Re: suggesting dnarrange and lamassemble
Nilesh Patra
Re: suggesting dnarrange and lamassemble
Frith, Martin
Re: suggesting dnarrange and lamassemble
Nilesh Patra
Re: suggesting dnarrange and lamassemble
Frith, Martin
Added autopkgtests for megadepth
Mohd Bilal
Re: Added autopkgtests for megadepth
Nilesh Patra
Re: Naming scheme of fis-gtm binary packages (Was: Bug#1009900: fis-gtm: Multiple CVEs in fis-gtm)
Shah, Amul
Re: Naming scheme of fis-gtm binary packages (Was: Bug#1009900: fis-gtm: Multiple CVEs in fis-gtm)
Andreas Tille
Re: Naming scheme of fis-gtm binary packages (Was: Bug#1009900: fis-gtm: Multiple CVEs in fis-gtm)
Andreas Tille
Re: Naming scheme of fis-gtm binary packages (Was: Bug#1009900: fis-gtm: Multiple CVEs in fis-gtm)
Karsten Hilbert
Re: Naming scheme of fis-gtm binary packages (Was: Bug#1009900: fis-gtm: Multiple CVEs in fis-gtm)
Andreas Tille
Re: Bug#1014647: ITP: abpoa -- adaptive banded Partial Order Alignment
Étienne Mollier
variability in TRANSIT test_resampling* sig_qvals
Étienne Mollier
Added autopkgtest for rockhopper
Mohd Bilal
Re: Added autopkgtest for rockhopper
Nilesh Patra
Debian Med video conference in preparation of Debian Science BoF next Thursday 2022-06-21 18:00 UTC
Andreas Tille
Re: Debian Med video conference in preparation of Debian Science BoF next Thursday 2022-07-21 18:00 UTC
Andreas Tille
Upgrading dssp, cif-tools, density-fitness and others
Andreas Tille
Re: Upgrading dssp, cif-tools, density-fitness and others
Maarten L. Hekkelman
Re: Upgrading dssp, cif-tools, density-fitness and others
Andreas Tille
Upgrading invesalius
Andreas Tille
Re: Upgrading invesalius
Thiago Franco de Moraes
Re: Upgrading invesalius
Andreas Tille
Re: Upgrading invesalius
Thiago Franco de Moraes
Re: Upgrading invesalius
Andreas Tille
Re: Upgrading invesalius
Thiago Franco de Moraes
Re: Upgrading invesalius
Andreas Tille
Re: Upgrading invesalius
Andreas Tille
Re: Upgrading invesalius
Thiago Franco de Moraes
Re: q2cli: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.10 returned exit code 13
Nilesh Patra
Re: q2cli: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.10 returned exit code 13
Andreas Tille
Added autopkgtest for emmax
Mohd Bilal
Re: Added autopkgtest for emmax
Nilesh Patra
[Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Andreas Tille
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Nilesh Patra
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Andreas Tille
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Nilesh Patra
Re: Bug#1015585: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Andreas Tille
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Bálint Réczey
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Andreas Tille
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Mattia Rizzolo
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Nilesh Patra
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Andreas Tille
Re: [Help] Re: Bug#1015585: plast: ftbfs with LTO (link time optimization) enabled
Mattia Rizzolo
RFS : disable tests for dicomnifti on s390,i386 (#1013364)
Mohd Bilal
Re: RFS : disable tests for dicomnifti on s390,i386 (#1013364)
Andreas Tille
Added autopkgtest for zalign
Mohd Bilal
Re: Added autopkgtest for zalign
Andreas Tille
spades: truspades command deprecation since v3.15
Étienne Mollier
Re: spades: truspades command deprecation since v3.15
Étienne Mollier
Re: spades: truspades command deprecation since v3.15
Nilesh Patra
Re: spades: truspades command deprecation since v3.15
Étienne Mollier
Re: Bug#1015978: Should falcon be removed?
Andreas Tille
Re: Bug#1015978: Should falcon be removed?
Moritz Mühlenhoff
GCC-12 bugs became RC - some low hanging fruits remaining + one or two harder ones
Andreas Tille
Re: GCC-12 bugs became RC - some low hanging fruits remaining + one or two harder ones
Étienne Mollier
Re: GCC-12 bugs became RC - some low hanging fruits remaining + one or two harder ones
Andreas Tille
Re: GCC-12 bugs became RC - some low hanging fruits remaining + one or two harder ones
Étienne Mollier
Bug#1016046: ITP: genomicsdb -- sparse array storage library for genomics
Pierre Gruet
CMake help needed for tiddit
Andreas Tille
Re: CMake help needed for tiddit
Pierre Gruet
Re: CMake help needed for tiddit
Nilesh Patra
Re: CMake help needed for tiddit
Andreas Tille
Re: CMake help needed for tiddit
Nilesh Patra
Re: CMake help needed for tiddit
Andreas Tille
[Help] unifrac-tools: symbol `_ZTVN2H511IdComponentE' can not be used when making a shared object; recompile with -fPIC
Andreas Tille
Re: [Help] unifrac-tools: symbol `_ZTVN2H511IdComponentE' can not be used when making a shared object; recompile with -fPIC
Aaron M. Ucko
Re: [Help] unifrac-tools: symbol `_ZTVN2H511IdComponentE' can not be used when making a shared object; recompile with -fPIC
Andreas Tille
Finishing ncbi-vdb and sra-sdk
Andreas Tille
Re: Finishing ncbi-vdb and sra-sdk
Aaron M. Ucko
Re: Finishing ncbi-vdb and sra-sdk
Andreas Tille
Re: Finishing ncbi-vdb and sra-sdk
Andreas Tille
Re: Finishing ncbi-vdb and sra-sdk
Aaron M. Ucko
Re: Finishing ncbi-vdb and sra-sdk
Andreas Tille
Bug#1016128: RM: edfbrowser [s390x] -- ROM; upstream only supports little endian
Étienne Mollier
Bug#1016197: RM: tiddit [s390x] -- ROM; Depends on python3-pysam which is unavailable on s390x
Nilesh Patra
sight failing to build
Pierre Gruet
igblast accepted - how can it be used to test igdiscover
Andreas Tille
Re: igblast accepted - how can it be used to test igdiscover
Aaron M. Ucko
Re: rdflib: URLInputSource can be abused to retrieve arbitrary documents if used naïvely
Nilesh Patra
Re: rdflib: URLInputSource can be abused to retrieve arbitrary documents if used naïvely
Andrius Merkys
RFH: porting bolt-lmm
Nilesh Patra
The last update was on 19:20 GMT Sun Jul 31. There are 100 messages. Page 1 of 1.
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