[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#1029432: marked as done (ITP: metaeuk -- sensitive, high-throughput gene discovery and annotation for metagenomics)



Your message dated Thu, 02 Feb 2023 19:00:13 +0000
with message-id <E1pNeof-00DmkL-UM@fasolo.debian.org>
and subject line Bug#1029432: fixed in metaeuk 6-a5d39d9+ds-1
has caused the Debian Bug report #1029432,
regarding ITP: metaeuk -- sensitive, high-throughput gene discovery and annotation for metagenomics
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
1029432: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029432
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss <satta@debian.org>
X-Debbugs-Cc: debian-devel@lists.debian.org, debian-med@lists.debian.org

* Package name    : metaeuk
  Version         : 6-a5d39d9
  Upstream Author : Eli Levy Karin <eli.levy.karin@gmail.com> and co-authors
* URL             : https://github.com/soedinglab/metaeuk
* License         : GPL3
  Programming Lang: C++
  Description     : sensitive, high-throughput gene discovery and annotation for metagenomics

MetaEuk is a modular toolkit designed for large-scale gene discovery and
annotation in eukaryotic metagenomic contigs. MetaEuk combines the fast and
sensitive homology search capabilities of MMseqs2 with a dynamic programming
procedure to recover optimal exons sets. It reduces redundancies in multiple
discoveries of the same gene and resolves conflicting gene predictions on the
same strand.

This is packaged as a dependency of busco and will be maintained by the
Debian Med team.

--- End Message ---
--- Begin Message ---
Source: metaeuk
Source-Version: 6-a5d39d9+ds-1
Done: Sascha Steinbiss <satta@debian.org>

We believe that the bug you reported is fixed in the latest version of
metaeuk, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1029432@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sascha Steinbiss <satta@debian.org> (supplier of updated metaeuk package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Sun, 22 Jan 2023 15:21:28 +0100
Source: metaeuk
Binary: metaeuk metaeuk-dbgsym metaeuk-examples
Architecture: source amd64 all
Version: 6-a5d39d9+ds-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <satta@debian.org>
Description:
 metaeuk    - sensitive, high-throughput gene discovery and annotation for meta
 metaeuk-examples - optional resources for the metaeuk package
Closes: 1029432
Changes:
 metaeuk (6-a5d39d9+ds-1) unstable; urgency=low
 .
   * Initial release (Closes: #1029432)
Checksums-Sha1:
 fc17b67d93ab53ccbb742728e2dc865e93ecb7bd 2249 metaeuk_6-a5d39d9+ds-1.dsc
 e377152b33bed8fd19b05309a5c1d003e8fc865c 6940588 metaeuk_6-a5d39d9+ds.orig.tar.xz
 1264617c69de6c00475ffcb8cf84395d178c92a2 7152 metaeuk_6-a5d39d9+ds-1.debian.tar.xz
 769685c75fb76304d5f9148571a867a6ae2e89ed 20995140 metaeuk-dbgsym_6-a5d39d9+ds-1_amd64.deb
 a849fc25e8181962a2dac8c982ecf2487f0004b3 9559676 metaeuk-examples_6-a5d39d9+ds-1_all.deb
 f4362853197af55167b495609bdd62d5dea23938 7962 metaeuk_6-a5d39d9+ds-1_amd64.buildinfo
 64e0d608f379464f7ade778f2df973cbb63f6794 3814560 metaeuk_6-a5d39d9+ds-1_amd64.deb
Checksums-Sha256:
 3a77ffbab6b6bbef310ce2484f336273d1d87d15be27558d6289b264e3e4a209 2249 metaeuk_6-a5d39d9+ds-1.dsc
 82b205a92de13b8e0f5a9933bbf631f3a4e808ee9fe4783022b3458cfe4cf5ce 6940588 metaeuk_6-a5d39d9+ds.orig.tar.xz
 4033c57b14e733d8959705a2c5919b83951f5eef43b7574444af00ad87ffc841 7152 metaeuk_6-a5d39d9+ds-1.debian.tar.xz
 e98ee47dfc62100d61f84d4a55e6f404c4439dd9a9e33ff63682900128f6f627 20995140 metaeuk-dbgsym_6-a5d39d9+ds-1_amd64.deb
 c0471c42059806700079835cdf9bf4c3abd8f181e3aeee45cd42d3bdf13032d0 9559676 metaeuk-examples_6-a5d39d9+ds-1_all.deb
 a47adc532d66acbf1ee05f2582ef993fe6a7539a5b97f06f64e3e5096bedfa07 7962 metaeuk_6-a5d39d9+ds-1_amd64.buildinfo
 93288e177ee9ac05f1ead215adf27eaaea3ddfe66971ce8143c5a00787d3b931 3814560 metaeuk_6-a5d39d9+ds-1_amd64.deb
Files:
 9972e1afd0e9fe9c219adeedd29401de 2249 science optional metaeuk_6-a5d39d9+ds-1.dsc
 5254d6d254e26de5baef6f16b2653ec4 6940588 science optional metaeuk_6-a5d39d9+ds.orig.tar.xz
 6909c66e6d9312619de4d82b9e022a2a 7152 science optional metaeuk_6-a5d39d9+ds-1.debian.tar.xz
 8f5ad8d96d3c236a1e5e242381ac729c 20995140 debug optional metaeuk-dbgsym_6-a5d39d9+ds-1_amd64.deb
 beaadd1d69be009bea1fdd0d733ab28a 9559676 science optional metaeuk-examples_6-a5d39d9+ds-1_all.deb
 cf3cc1abacdc8daf07ced99886d008b1 7962 science optional metaeuk_6-a5d39d9+ds-1_amd64.buildinfo
 2b76aa0f7cdb644e87cc40a611926be8 3814560 science optional metaeuk_6-a5d39d9+ds-1_amd64.deb

-----BEGIN PGP SIGNATURE-----
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=N7bQ
-----END PGP SIGNATURE-----

--- End Message ---

Reply to: