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Bug#1024746: marked as done (ITP: muscle3 -- multiple alignment program of protein sequences)

Your message dated Sat, 03 Dec 2022 19:09:28 +0000
with message-id <E1p1XtA-00FeHW-RF@fasolo.debian.org>
and subject line Bug#1024746: fixed in muscle3 3.8.1551-1
has caused the Debian Bug report #1024746,
regarding ITP: muscle3 -- multiple alignment program of protein sequences
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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-- 
1024746: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1024746
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: debian-med

Subject: ITP: muscle3 -- multiple alignment program of protein sequences
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist

* Package name    : muscle3
  Version         : 3.8.1551
  Upstream Author : Copyright: © Robert C. Edgar "Bob" <muscle@drive5.com>
* URL             : https://www.drive5.com/muscle/
* License         : PD-dedication
  Programming Lang: C
  Description     : multiple alignment program of protein sequences
 MUSCLE is a multiple alignment program for protein sequences. MUSCLE
 stands for multiple sequence comparison by log-expectation. In the
 authors tests, MUSCLE achieved the highest scores of all tested
 programs on several alignment accuracy benchmarks, and is also one of
 the fastest programs out there.
 .
 This is version 3 of the muscle program.  It is a different program
 than muscle version 5 which is packaged as muscle in Debian.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/muscle3

--- End Message ---
--- Begin Message --- 
Source: muscle3
Source-Version: 3.8.1551-1
Done: Andreas Tille <tille@debian.org>

We believe that the bug you reported is fixed in the latest version of
muscle3, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1024746@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated muscle3 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Thu, 24 Nov 2022 09:44:25 +0100
Source: muscle3
Binary: muscle3 muscle3-dbgsym
Architecture: source amd64
Version: 3.8.1551-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 muscle3    - multiple alignment program of protein sequences
Closes: 1024746
Changes:
 muscle3 (3.8.1551-1) unstable; urgency=medium
 .
   * Re-introduce muscle version 3 as a different program
     (see https://lists.debian.org/debian-med/2022/11/msg00080.html)
     Closes: #1024746
   * Epoch can be dropped since the package name was changed
   * Standards-Version: 4.6.1 (routine-update)
   * debhelper-compat 13 (routine-update)
   * Add salsa-ci file (routine-update)
   * Rules-Requires-Root: no (routine-update)
   * Use secure URI in Homepage field.
   * Fix day-of-week for changelog entry 3.52-1.
   * Rename binary and docs to muscle3
   * Lintian-override (see lintian bug #1017966)
Checksums-Sha1:
 b410330b83261ebe4c6f7269290bb1286ea01a59 2042 muscle3_3.8.1551-1.dsc
 9d9d56e5f064686491a3ef348cd565b1fc1ff3d3 190019 muscle3_3.8.1551.orig.tar.gz
 ac70ff2322e6bfe17aa7c133467e1a76a3436e28 22468 muscle3_3.8.1551-1.debian.tar.xz
 5926a2b129cb31959b3e5a554ccb26dcd12a9fd9 833584 muscle3-dbgsym_3.8.1551-1_amd64.deb
 6be48148465f9b0bda4c672347900bab081f0a89 6301 muscle3_3.8.1551-1_amd64.buildinfo
 5cfbb1c8c0cbda6c49d4adc51f0de1c181af61be 243472 muscle3_3.8.1551-1_amd64.deb
Checksums-Sha256:
 6fc3b152e58250f93afa4bf69af91e2a33e9698a02e0146992732c892de872e8 2042 muscle3_3.8.1551-1.dsc
 c70c552231cd3289f1bad51c9bd174804c18bb3adcf47f501afec7a68f9c482e 190019 muscle3_3.8.1551.orig.tar.gz
 55fcd7e979a26a9c0223a64b77093c3cf81741a73b1dc9e2afc271093e1bcc73 22468 muscle3_3.8.1551-1.debian.tar.xz
 959e843ae599ca8efa2923a64392403af74883cd72a2150a30553c7def816b4f 833584 muscle3-dbgsym_3.8.1551-1_amd64.deb
 1ff08f1a87d1f6ec7af74ccf8b606387f605e494cd744d62bdf70279f47fafb8 6301 muscle3_3.8.1551-1_amd64.buildinfo
 c1a3ed80dd98a67da5e000cca68e5002e3d277b87e7d39fac1474d1093f1aca4 243472 muscle3_3.8.1551-1_amd64.deb
Files:
 088f3fea3844c6247992226aabafa359 2042 science optional muscle3_3.8.1551-1.dsc
 1b7c9661f275a82d3cf708f923736bf8 190019 science optional muscle3_3.8.1551.orig.tar.gz
 b0f525c10e5345dbaa3e813d145542f3 22468 science optional muscle3_3.8.1551-1.debian.tar.xz
 71de72147197ccf5d09982dff5fd13e4 833584 debug optional muscle3-dbgsym_3.8.1551-1_amd64.deb
 db29f5aff7878a676f985a4fe2c2aeed 6301 science optional muscle3_3.8.1551-1_amd64.buildinfo
 4740f443e6b06849d70ce6a13a6ce841 243472 science optional muscle3_3.8.1551-1_amd64.deb

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--- End Message ---
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