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Bug#1008622: marked as done (ITP: python-pdbfixer -- Fix problems in Protein Data Bank files)

Your message dated Wed, 06 Apr 2022 18:07:00 +0000
with message-id <E1ncA3Y-000J32-8F@fasolo.debian.org>
and subject line Bug#1008622: fixed in python-pdbfixer 1.8.1-1
has caused the Debian Bug report #1008622,
regarding ITP: python-pdbfixer -- Fix problems in Protein Data Bank files
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
1008622: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1008622
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Owner: Andrius Merkys <merkys@debian.org>
Severity: wishlist

* Package name    : python-pdbfixer
  Version         : 1.8.1
  Upstream Author : Stanford University and Peter Eastman
* URL             : https://github.com/openmm/pdbfixer
* License         : Expat
  Programming Lang: Python
  Description     : Fix problems in Protein Data Bank files (Python 3)

PDBFixer is an application for fixing problems in Protein Data Bank
files in preparation for simulating them. It can automatically fix the
following problems:

  - Add missing heavy atoms.
  - Add missing hydrogen atoms.
  - Build missing loops.
  - Convert non-standard residues to their standard equivalents.
  - Select a single position for atoms with multiple alternate positions
listed.
  - Delete unwanted chains from the model.
  - Delete unwanted heterogens.
  - Build a water box for explicit solvent simulations.

Remark: This package is to be maintained with Debian Python Team at
   https://salsa.debian.org/python-team/packages/python-pdbfixer

--- End Message ---
--- Begin Message --- 
Source: python-pdbfixer
Source-Version: 1.8.1-1
Done: Andrius Merkys <merkys@debian.org>

We believe that the bug you reported is fixed in the latest version of
python-pdbfixer, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1008622@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andrius Merkys <merkys@debian.org> (supplier of updated python-pdbfixer package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Tue, 29 Mar 2022 13:38:20 -0400
Source: python-pdbfixer
Binary: python3-pdbfixer
Architecture: source all
Version: 1.8.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Team <team+python@tracker.debian.org>
Changed-By: Andrius Merkys <merkys@debian.org>
Description:
 python3-pdbfixer - Fix problems in Protein Data Bank files (Python 3)
Closes: 1008622
Changes:
 python-pdbfixer (1.8.1-1) unstable; urgency=medium
 .
   * Initial release (Closes: #1008622)
Checksums-Sha1:
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 07043785593ac0b693a12e9e2b580adec3eb8209 647653 python-pdbfixer_1.8.1.orig.tar.gz
 9c81f632e258714be07d5555159453106154c586 2724 python-pdbfixer_1.8.1-1.debian.tar.xz
 e593e1696edf6d2773f0d6f42c8bc47b0efea9ca 8133 python-pdbfixer_1.8.1-1_amd64.buildinfo
 8c17c912e6fbd38cee741bb65048a9aaa9048836 440312 python3-pdbfixer_1.8.1-1_all.deb
Checksums-Sha256:
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 d50551abfe9dbaefc066f4d9d400cdebe57f1fefd9de9d01e12beb87efd99595 647653 python-pdbfixer_1.8.1.orig.tar.gz
 b130f053f65ce3e62354c421f78d6d468306fc030d731012a5df274334a5a6e4 2724 python-pdbfixer_1.8.1-1.debian.tar.xz
 8d267fed05e3aceb7eb5263d00d46f1a97f5feedb98d02f184c55dadbb68c6e4 8133 python-pdbfixer_1.8.1-1_amd64.buildinfo
 85a6d8dc456bc0c969e63fc57c2b6d94a361c22d1e15e500983fffdf22b7e234 440312 python3-pdbfixer_1.8.1-1_all.deb
Files:
 fdc59c04784ce7a25ad5a8a0b93712cd 2203 python optional python-pdbfixer_1.8.1-1.dsc
 9186c650d15bd3f0477ff7eadab24900 647653 python optional python-pdbfixer_1.8.1.orig.tar.gz
 9324b0d7c135fe2e0ef501be9074c4a0 2724 python optional python-pdbfixer_1.8.1-1.debian.tar.xz
 bb3c95ab33466cabe6b146b552cc1b8a 8133 python optional python-pdbfixer_1.8.1-1_amd64.buildinfo
 e626fc090de36cd13b862bb810d0d753 440312 python optional python3-pdbfixer_1.8.1-1_all.deb

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--- End Message ---
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