Bug#1027415: ITP: python-bioframe -- library to enable flexible, scalable operations on genomic interval dataframes
Package: wnpp
Severity: wishlist
X-Debbugs-Cc: nilesh@debian.org
Subject: ITP: python-bioframe -- library to enable flexible, scalable operations on genomic interval dataframes
Package: wnpp
Owner: Nilesh Patra <nilesh@debian.org>
Severity: wishlist
* Package name : python-bioframe
Version : 0.3.3
Upstream Author : Open2C
* URL : https://github.com/open2c/bioframe
* License : Expat
Programming Lang: Python
Description : library to enable flexible, scalable operations on genomic interval dataframes
Building bioframe directly on top of pandas enables immediate access
to a rich set of dataframe operations. Working in python enables
rapid visualization (e.g. matplotlib, seaborn) and iteration of
genomic analyses.
.
Bioframe implements a variety of genomic interval operations directly on
dataframes. Bioframe also includes functions for loading diverse genomic
data formats, and performing operations on special classes of genomic
intervals, including chromosome arms and fixed size bins.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/python-bioframe
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