Bug#1008737: ITP: r-bioc-megadepth -- megadepth: BigWig and BAM related utilities
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-megadepth -- megadepth: BigWig and BAM related utilities
Package: wnpp
Owner: Steffen Moeller <moeller@debian.org>
Severity: wishlist
* Package name : r-bioc-megadepth
Version : 1.4.0
Upstream Author : Leonardo Collado-Torres,
* URL : https://bioconductor.org/packages/megadepth/
* License : Artistic-2.0
Programming Lang: GNU R
Description : megadepth: BigWig and BAM related utilities
This package provides an R interface to Megadepth by Christopher
Wilks available at https://github.com/ChristopherWilks/megadepth. It is
particularly useful for computing the coverage of a set of genomic regions
across bigWig or BAM files. With this package, you can build base-pair
coverage matrices for regions or annotations of your choice from BigWig
files. Megadepth was used to create the raw files provided by
https://bioconductor.org/packages/recount3.
Remark: This package is maintained by Debian R Packages Maintainers at
https://salsa.debian.org/r-pkg-team/r-bioc-megadepth
Reply to: