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Bug#985895: marked as done (ITP: bamclipper -- Remove gene-specific primer sequences from SAM/BAM alignments)

Your message dated Fri, 09 Apr 2021 12:00:09 +0000
with message-id <E1lUpo1-000B8y-7U@fasolo.debian.org>
and subject line Bug#985895: fixed in bamclipper 1.0.0-1
has caused the Debian Bug report #985895,
regarding ITP: bamclipper -- Remove gene-specific primer sequences from SAM/BAM alignments
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
985895: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=985895
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist

Subject: ITP: bamclipper -- Remove gene-specific primer sequences from SAM/BAM alignments
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist

* Package name    : bamclipper
  Version         : 1.0.0
  Upstream Author : Chun Hang Au
* URL             : https://github.com/tommyau/bamclipper
* License         : MIT
  Programming Lang: (C, C++, C#, Perl, Python, etc.)
  Description     : Remove gene-specific primer sequences from SAM/BAM alignments
 Remove gene-specific primer sequences from SAM/BAM alignments of PCR
 amplicons by soft-clipping.
 .
 bamclipper.sh soft-clips gene-specific primers from BAM alignment file based
 on genomic coordinates of primer pairs in BEDPE format.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/bamclipper

--- End Message ---
--- Begin Message --- 
Source: bamclipper
Source-Version: 1.0.0-1
Done: Andreas Tille <tille@debian.org>

We believe that the bug you reported is fixed in the latest version of
bamclipper, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 985895@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated bamclipper package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Fri, 26 Mar 2021 10:03:07 +0100
Source: bamclipper
Binary: bamclipper
Architecture: source all
Version: 1.0.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 bamclipper - Remove gene-specific primer sequences from SAM/BAM alignments
Closes: 985895
Changes:
 bamclipper (1.0.0-1) unstable; urgency=medium
 .
   * Initial release (Closes: #985895)
Checksums-Sha1:
 7044133aa4604c4dc27b74ba0827d19a7cec7d40 2010 bamclipper_1.0.0-1.dsc
 6052df7cd597cc8d3450a393c0f0c38fa8290b1d 5832 bamclipper_1.0.0.orig.tar.gz
 0522c19f4ee2fff0c967193fc9c5a47498dfb40c 35740 bamclipper_1.0.0-1.debian.tar.xz
 0fe680312049dd2361e5446778994f845c54903d 6032 bamclipper_1.0.0-1_all.deb
 7a200f2912eaeb3e16436d7b5260dc47af759c71 5586 bamclipper_1.0.0-1_amd64.buildinfo
Checksums-Sha256:
 c78b539b39c3ff4c649e65046ea3c72e503fc7671e7783971740d80020e4d30a 2010 bamclipper_1.0.0-1.dsc
 aa43e4f9cf6b1fb58ac2c6329acc9870e9522e5ba20286b50312ccf89a18f2fc 5832 bamclipper_1.0.0.orig.tar.gz
 199f4b096cc56d60e86d0943a5ab1807c0dbe3f7426b8a8b6ec4120d8ed889f4 35740 bamclipper_1.0.0-1.debian.tar.xz
 3be8b0dbcec497a8e8da72e4bad6ec5bb9fdebc5623c22b4fa339f34145f3f85 6032 bamclipper_1.0.0-1_all.deb
 094d5e5fd3bbc2bd605465029ee156aab37006bed2ec2047a21faf058507757b 5586 bamclipper_1.0.0-1_amd64.buildinfo
Files:
 b7b461aa8cfc9e053422e901bd3d397e 2010 science optional bamclipper_1.0.0-1.dsc
 9434cf6a23e69b9dabde2ee5c9a58104 5832 science optional bamclipper_1.0.0.orig.tar.gz
 3957e3bcb050b7f7f9bef8326e56aa8d 35740 science optional bamclipper_1.0.0-1.debian.tar.xz
 a6a490f7c9e08de47544c8cd4bf371e3 6032 science optional bamclipper_1.0.0-1_all.deb
 d4542c780840816da3dfc285db5c78a0 5586 science optional bamclipper_1.0.0-1_amd64.buildinfo

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