[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#985528: marked as done (ITP: oscar4 -- automated annotation of chemistry in scientific articles)



Your message dated Thu, 08 Apr 2021 12:00:13 +0000
with message-id <E1lUTKX-000AxR-Er@fasolo.debian.org>
and subject line Bug#985528: fixed in oscar4 5.0.0+dfsg-1
has caused the Debian Bug report #985528,
regarding ITP: oscar4 -- automated annotation of chemistry in scientific articles
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
985528: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=985528
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Owner: Andrius Merkys <merkys@debian.org>
Severity: wishlist

* Package name    : oscar4
  Version         : 5.0.0
  Upstream Author : David Jessop et al.
* URL             : https://bitbucket.org/wwmm/oscar4
* License         : Artistic-2.0
  Programming Lang: Java
  Description     : automated annotation of chemistry in scientific articles

OSCAR (Open Source Chemistry Analysis Routines) is an open source
extensible system for the automated annotation of chemistry in
scientific articles. It can be used to identify chemical names, reaction
names, ontology terms, enzymes and chemical prefixes and adjectives, and
chemical data such as state, yield, IR, NMR and mass spectra and
elemental analyses. In addition, where possible, any chemical names
detected will be annotated with structures derived either by lookup, or
name-to-structure parsing using OPSIN or with identifiers from the ChEBI
(Chemical Entities of Biological Interest) ontology.

This package is to be maintained with Debichem Team.

--- End Message ---
--- Begin Message ---
Source: oscar4
Source-Version: 5.0.0+dfsg-1
Done: Andrius Merkys <merkys@debian.org>

We believe that the bug you reported is fixed in the latest version of
oscar4, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 985528@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andrius Merkys <merkys@debian.org> (supplier of updated oscar4 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Wed, 28 Aug 2019 10:42:13 -0400
Source: oscar4
Binary: liboscar4-java
Architecture: source all
Version: 5.0.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Changed-By: Andrius Merkys <merkys@debian.org>
Description:
 liboscar4-java - automated annotation of chemistry in scientific articles
Closes: 985528
Changes:
 oscar4 (5.0.0+dfsg-1) unstable; urgency=medium
 .
   * Initial release (Closes: #985528)
Checksums-Sha1:
 3f0241c19f9fb127aa2807bc206b5198c27c0e34 2208 oscar4_5.0.0+dfsg-1.dsc
 f70b4400c6af3b4ad431546903e1f199a7649386 5974664 oscar4_5.0.0+dfsg.orig.tar.xz
 4c44d2f829921e9c5dc6b5daceedeed892d94a6d 10648 oscar4_5.0.0+dfsg-1.debian.tar.xz
 f6431dd87f23daf4e29e686e1fbed1d61f9d7edb 6373928 liboscar4-java_5.0.0+dfsg-1_all.deb
 0eb1567f8fae83eef90467c48a3a906586cee86e 14254 oscar4_5.0.0+dfsg-1_amd64.buildinfo
Checksums-Sha256:
 c7c15e28970a4e81851470869b54aa690723cd986a88b64c8df4cc0f1eef6747 2208 oscar4_5.0.0+dfsg-1.dsc
 a9671d46a5de0b18d533d975cedcda2fe5c317a7a7a78e19732ca544a6c27d72 5974664 oscar4_5.0.0+dfsg.orig.tar.xz
 b9a7296d0b73d8f0b7c186cdd5253c99d5b34bfde8827d35aecffa88facc991a 10648 oscar4_5.0.0+dfsg-1.debian.tar.xz
 639b07d0b75ac25e7c9284a8c561c71a1f255efb5fcdc75ef3672ea7cd5690ff 6373928 liboscar4-java_5.0.0+dfsg-1_all.deb
 bb14fc14b6ce754e08ff40be31b4743aae06dac2f3bb1fb2bfdcce1f8236f9fa 14254 oscar4_5.0.0+dfsg-1_amd64.buildinfo
Files:
 6253e3b2c35d586154c6bfab13720893 2208 science optional oscar4_5.0.0+dfsg-1.dsc
 c7070951246f7da2c74496027398f16a 5974664 science optional oscar4_5.0.0+dfsg.orig.tar.xz
 9e78a4fe86a81cedbe02e8d019e3e02c 10648 science optional oscar4_5.0.0+dfsg-1.debian.tar.xz
 01f763e22b714f7d13a4c05e38363ff5 6373928 science optional liboscar4-java_5.0.0+dfsg-1_all.deb
 e369fcca12c31f892f65bb08ea0332bc 14254 science optional oscar4_5.0.0+dfsg-1_amd64.buildinfo

-----BEGIN PGP SIGNATURE-----
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=aYgA
-----END PGP SIGNATURE-----

--- End Message ---

Reply to: