[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#983022: marked as done (RFP: bio-vcf -- DSL for parsing of bioinformatics VCF format (DebianMed))



Your message dated Thu, 24 Jun 2021 23:55:07 +0530
with message-id <YNTOA+VaPJU+xeGB@debian>
and subject line Re: RFP: bio-vcf -- DSL for parsing of bioinformatics VCF format (DebianMed)
has caused the Debian Bug report #983022,
regarding RFP: bio-vcf -- DSL for parsing of bioinformatics VCF format (DebianMed)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
983022: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=983022
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist

* Package name    : bio-vcf
  Version         : 0.9.5
  Upstream Author : Pjotr Prins <pjotr.public44@thebird.nl>
* URL             : https://github.com/vcflib/bio-vcf
* License         : MIT
  Programming Lang: Ruby
  Description     : binary tool offers DSL for VCF parsing - used in bioinformatics pipelines (DebianMed)

bio-vcf is used in existing workflows and we think it would be a valuable addition to Debian Med.
It is a CLI tool packaged as a Ruby gem and has no runtime dependencies other than Ruby. It
is also packaged in GNU Guix as https://guix.gnu.org/en/packages/bio-vcf-0.9.5/. As the author
I am happy to support upstream issues, though I expect few.

--- End Message ---
--- Begin Message ---
Hi,

On Thu, 18 Feb 2021 10:41:48 +0100 wrk <wrk@thebird.nl> wrote:
> Package: wnpp
> Severity: wishlist
> 
> * Package name    : bio-vcf
>   Version         : 0.9.5
>   Upstream Author : Pjotr Prins <pjotr.public44@thebird.nl>
> * URL             : https://github.com/vcflib/bio-vcf
> * License         : MIT
>   Programming Lang: Ruby
>   Description     : binary tool offers DSL for VCF parsing - used in bioinformatics pipelines (DebianMed)
> 
> bio-vcf is used in existing workflows and we think it would be a valuable addition to Debian Med.
> It is a CLI tool packaged as a Ruby gem and has no runtime dependencies other than Ruby. It
> is also packaged in GNU Guix as https://guix.gnu.org/en/packages/bio-vcf-0.9.5/. As the author
> I am happy to support upstream issues, though I expect few.

This has landed in the archive, hence closing the issue.
Thanks for filing this bug

[1]: https://tracker.debian.org/pkg/bio-vcf

Nilesh

Attachment: signature.asc
Description: PGP signature


--- End Message ---

Reply to: