[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#964202: marked as done (ITP: mecat2 -- ultra-fast and accurate de novo assembly tools for SMRT reads)

Your message dated Sat, 17 Oct 2020 23:00:13 +0000
with message-id <E1kTvBN-000D0l-IO@fasolo.debian.org>
and subject line Bug#964202: fixed in mecat2 0.0+git20200428.f54c542+ds-1
has caused the Debian Bug report #964202,
regarding ITP: mecat2 -- ultra-fast and accurate de novo assembly tools for SMRT reads
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
964202: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=964202
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist

Subject: ITP: mecat2 -- ultra-fast and accurate de novo assembly tools for SMRT reads
Package: wnpp
Owner: Shayan Doust <hello@shayandoust.me>
Severity: wishlist

* Package name    : mecat2
  Version         : 0.0+git20200428.f54c542
  Upstream Author : Chuan-Le Xiao
* URL             : https://github.com/xiaochuanle/MECAT2
* License         : GPL-3
  Programming Lang: C
  Description     : ultra-fast and accurate de novo assembly tools for SMRT reads
 An improved version of MECAT. It is an ultra-fast and accurate mapping
 and error correcting de novo assembly tools for single molecula
 sequencing (SMRT) reads. MECAT2 consists of the following three modules:
  1. mecat2map: a fast and accurate alignment tool for SMRT reads.
  2. mecat2cns: correct noisy reads based on their pairwise overlaps.
  3. fsa: a string graph based assembly tool.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/mecat2

--- End Message ---
--- Begin Message --- 
Source: mecat2
Source-Version: 0.0+git20200428.f54c542+ds-1
Done: Shayan Doust <hello@shayandoust.me>

We believe that the bug you reported is fixed in the latest version of
mecat2, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 964202@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Shayan Doust <hello@shayandoust.me> (supplier of updated mecat2 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Mon, 29 Jun 2020 14:29:05 +0100
Source: mecat2
Binary: mecat2 mecat2-dbgsym
Architecture: source amd64
Version: 0.0+git20200428.f54c542+ds-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Shayan Doust <hello@shayandoust.me>
Description:
 mecat2     - ultra-fast and accurate de novo assembly tools for SMRT reads
Closes: 964202
Changes:
 mecat2 (0.0+git20200428.f54c542+ds-1) unstable; urgency=medium
 .
   * Initial release (Closes: #964202)
Checksums-Sha1:
 cef1c2b824ecb0f37289ee91407aa8c0988a6c77 2123 mecat2_0.0+git20200428.f54c542+ds-1.dsc
 3422fa4cc700ac60aaec8050b8a98612b444b678 381084 mecat2_0.0+git20200428.f54c542+ds.orig.tar.xz
 4c52177315ffb091bd9fe4d81cfae2e785c6408c 338661312 mecat2_0.0+git20200428.f54c542+ds-1.debian.tar.xz
 658c73f1ac1e7a0efead147e71f9930549fffd5e 109712 mecat2-dbgsym_0.0+git20200428.f54c542+ds-1_amd64.deb
 125f4527ba8ec09363be2f9892be9f38e0a6aa0a 5987 mecat2_0.0+git20200428.f54c542+ds-1_amd64.buildinfo
 e41883a35396714f84dcab3dfc35ed1480d15782 761152 mecat2_0.0+git20200428.f54c542+ds-1_amd64.deb
Checksums-Sha256:
 c4ad564ab9d5f2375265a922f1401d62267c6187cf09b6c410844e293dfe412f 2123 mecat2_0.0+git20200428.f54c542+ds-1.dsc
 32f66c44306f1ebffed4ef3b5ba26041387d16561627ff93aa69bf6ee1107e31 381084 mecat2_0.0+git20200428.f54c542+ds.orig.tar.xz
 22d905e667b9ec18d530e51521f3f71b04a07956e4089d401d27458a3bca9d5e 338661312 mecat2_0.0+git20200428.f54c542+ds-1.debian.tar.xz
 32ae2bf20396e116951dc29f7b81ad12b59464ff5e1e9d3ca3b6f6517d199414 109712 mecat2-dbgsym_0.0+git20200428.f54c542+ds-1_amd64.deb
 c24e4e8ab038facaaa9491efcf4d50f8b998a2f635d3c3e8d1f72ddc1d902cfe 5987 mecat2_0.0+git20200428.f54c542+ds-1_amd64.buildinfo
 7f2b9062dae902736b1df71d43b29f985071ea1e26c8f50412cd127a55e02aa0 761152 mecat2_0.0+git20200428.f54c542+ds-1_amd64.deb
Files:
 cc2929c6fa311333975fe5c2e4e53f07 2123 science optional mecat2_0.0+git20200428.f54c542+ds-1.dsc
 1e944b07acb5474e4da65cb10b829ec0 381084 science optional mecat2_0.0+git20200428.f54c542+ds.orig.tar.xz
 b754225cb178516a5bb4ac1f860ee9b0 338661312 science optional mecat2_0.0+git20200428.f54c542+ds-1.debian.tar.xz
 9b4610868283ca956eaf0bfe1a4cbfea 109712 debug optional mecat2-dbgsym_0.0+git20200428.f54c542+ds-1_amd64.deb
 9f46543121035b2b28947b50dab7de25 5987 science optional mecat2_0.0+git20200428.f54c542+ds-1_amd64.buildinfo
 ff045de14e6b76a210cb169578231f4a 761152 science optional mecat2_0.0+git20200428.f54c542+ds-1_amd64.deb

-----BEGIN PGP SIGNATURE-----
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=PIeq
-----END PGP SIGNATURE-----

--- End Message ---
Reply to: