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Bug#963758: marked as done (ITP: plasmidid -- mapping-based, assembly-assisted plasmid identification tool)



Your message dated Sun, 13 Sep 2020 21:00:11 +0000
with message-id <E1kHZ6Z-000IIO-C3@fasolo.debian.org>
and subject line Bug#963758: fixed in plasmidid 1.6.3+dfsg-1
has caused the Debian Bug report #963758,
regarding ITP: plasmidid -- mapping-based, assembly-assisted plasmid identification tool
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
963758: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=963758
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist

Subject: ITP: plasmidid -- mapping-based, assembly-assisted plasmid identification tool
Package: wnpp
Owner: Steffen Moeller <moeller@debian.org>
Severity: wishlist

* Package name    : plasmidid
  Version         : 1.6.3
  Upstream Author : Luis Sian, Miguel Julia, Pedro Scampoy, Sara Monzón
* URL             : https://github.com/BU-ISCIII/plasmidID
* License         : GPL-3
  Programming Lang: Python
  Description     : mapping-based, assembly-assisted plasmid identification tool
 PlasmidID is a mapping-based, assembly-assisted plasmid identification
 tool that analyzes and gives graphic solution for plasmid
 identification.
 .
 PlasmidID is a computational pipeline that maps Illumina reads over
 plasmid database sequences. The k-mer filtered, most covered
 sequences are clustered by identity to avoid redundancy and the
 longest are used as scaffold for plasmid reconstruction. Reads are
 assembled and annotated by automatic and specific annotation. All
 information generated from mapping, assembly, annotation and local
 alignment analyses is gathered and accurately represented in a
 circular image which allow user to determine plasmidic composition in
 any bacterial sample.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/plasmidid

--- End Message ---
--- Begin Message ---
Source: plasmidid
Source-Version: 1.6.3+dfsg-1
Done: Steffen Moeller <moeller@debian.org>

We believe that the bug you reported is fixed in the latest version of
plasmidid, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 963758@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Steffen Moeller <moeller@debian.org> (supplier of updated plasmidid package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Fri, 26 Jun 2020 17:56:19 +0200
Source: plasmidid
Binary: plasmidid
Architecture: source all
Version: 1.6.3+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Steffen Moeller <moeller@debian.org>
Description:
 plasmidid  - mapping-based, assembly-assisted plasmid identification tool
Closes: 963758
Changes:
 plasmidid (1.6.3+dfsg-1) unstable; urgency=medium
 .
   * Initial release (Closes: #963758)
 .
   * Tests fail, apparently because of prokka
     https://github.com/BU-ISCIII/plasmidID/issues/12
Checksums-Sha1:
 3f354ebefc34e405f5e8c8eae7601fdc3adce2bc 2224 plasmidid_1.6.3+dfsg-1.dsc
 97fbd918f53e3aeb32788efa1422e5589ddb3999 84777540 plasmidid_1.6.3+dfsg.orig.tar.xz
 2ba344af70d0f993d2366b1d3b272582332390ca 4040 plasmidid_1.6.3+dfsg-1.debian.tar.xz
 f1ec712c2b9317c509b4b76a16ea89c637034fa9 46060 plasmidid_1.6.3+dfsg-1_all.deb
 9e8f6f41f95f5ec21f4559300123245400b16cfa 11289 plasmidid_1.6.3+dfsg-1_amd64.buildinfo
Checksums-Sha256:
 aeb9bddafd73bbbcc669385e8545082a158b414af33b4f3011e241cebf262393 2224 plasmidid_1.6.3+dfsg-1.dsc
 ed41afc9c31614e38a35d6347a0a39f39049828e572891a11872a4d7fb2f2c5c 84777540 plasmidid_1.6.3+dfsg.orig.tar.xz
 de45314b68e04f8cbacf6fc1b34bebc32c4f3fee28bcb5f8e338b3ffbee0b717 4040 plasmidid_1.6.3+dfsg-1.debian.tar.xz
 f8c00c969a82556d625bea06fedb14463fd86c14d1ab8fa62f4a4ab38e38bb49 46060 plasmidid_1.6.3+dfsg-1_all.deb
 7f5f5dad8c7a8d2ae7781dffd234a7f62678dab94011083ece34e459edbfb900 11289 plasmidid_1.6.3+dfsg-1_amd64.buildinfo
Files:
 8ab36de65295c97a4d9674366b3ac3e0 2224 science optional plasmidid_1.6.3+dfsg-1.dsc
 f8ac2a559c777531ecc662e6660aa894 84777540 science optional plasmidid_1.6.3+dfsg.orig.tar.xz
 f214588b073c60948e0586523dc51325 4040 science optional plasmidid_1.6.3+dfsg-1.debian.tar.xz
 820f572c2024e68fed7a474c1d66ed94 46060 science optional plasmidid_1.6.3+dfsg-1_all.deb
 f2419739d249ad4effad5b292418fb52 11289 science optional plasmidid_1.6.3+dfsg-1_amd64.buildinfo

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--- End Message ---

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