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Bug#962965: marked as done (ITP: yanosim -- read simulator nanopore DRS datasets)

Your message dated Tue, 14 Jul 2020 11:00:21 +0000
with message-id <E1jvIfd-000Epu-Vt@fasolo.debian.org>
and subject line Bug#962965: fixed in yanosim 0.1-1
has caused the Debian Bug report #962965,
regarding ITP: yanosim -- read simulator nanopore DRS datasets
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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-- 
962965: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=962965
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Nilesh Patra <npatra974@gmail.com>
X-Debbugs-CC: debian-devel@lists.debian.org


* Package name    : yanosim
  Version         : 0.1
  Upstream Author : Matthew Parker
* URL             : https://github.com/bartongroup/yanosim
* License         : Expat
  Programming Lang: Python
  Description     : Read simulator nanopore DRS datasets

 It has three options:
 1 yanosim model:
 Creates an model of mismatches, insertions and deletions
 based on an alignment of nanopore DRS reads to a
 reference. Reads should be aligned to a transcriptome
 i.e. without spliced alignment, using minimap2. They
 should have the cs tag.
 .
 2 yanosim quantify:
 Quantify the number of reads mapping to each
 transcript in a reference, so that the right number
 of reads can be simulated.
 .
 3 yanosim simulate
 Given a model created using yanosim model, and
 per-transcript read counts created using yanosim
 simulate, simulate error-prone long-reads from the
 given fasta file.

I take the responsibility to maintain this package.


--- End Message ---
--- Begin Message --- 
Source: yanosim
Source-Version: 0.1-1
Done: Nilesh Patra <npatra974@gmail.com>

We believe that the bug you reported is fixed in the latest version of
yanosim, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 962965@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Nilesh Patra <npatra974@gmail.com> (supplier of updated yanosim package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 16 Jun 2020 20:24:59 +0530
Source: yanosim
Binary: yanosim
Architecture: source amd64
Version: 0.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Nilesh Patra <npatra974@gmail.com>
Description:
 yanosim    - read simulator nanopore DRS datasets
Closes: 962965
Changes:
 yanosim (0.1-1) unstable; urgency=medium
 .
   * Initial release (Closes: #962965)
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Files:
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 4039859166283ac80a2221b08a0c3d88 7948 science optional yanosim_0.1.orig.tar.gz
 129d02262ef0f147d855e6101a1184ca 2972 science optional yanosim_0.1-1.debian.tar.xz
 938595eeebbaa23d29f820b0ad3cf9d3 5847 science optional yanosim_0.1-1_amd64.buildinfo
 910edf51c8f678d9229fccaa4312122e 9152 science optional yanosim_0.1-1_amd64.deb

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