[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#963050: marked as done (ITP: vt -- Tool set for short variant discovery in genetic sequence data)



Your message dated Mon, 13 Jul 2020 10:00:28 +0000
with message-id <E1juvG8-000Dbm-VQ@fasolo.debian.org>
and subject line Bug#963050: fixed in vt 0.57721+ds-1
has caused the Debian Bug report #963050,
regarding ITP: vt -- Tool set for short variant discovery in genetic sequence data
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
963050: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=963050
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist

Subject: ITP: vt -- Tool set for short variant discovery in genetic sequence data
Package: wnpp
Owner: Antoni Villalonga <antoni@friki.cat>
Severity: wishlist

* Package name    : vt
  Version         : 0.57721+ds
  Upstream Author : Adrian Tan <atks@umich.edu>
* URL             : https://genome.sph.umich.edu/wiki/Vt
* License         : MIT
  Programming Lang: C
  Description     : Tool set for short variant discovery in genetic sequence data
 vt is a variant tool set that discovers short variants from Next Generation
 Sequencing data.
 .
 Visit http://genome.sph.umich.edu/wiki/vt for instructions.
 .
 vt uses htslib, tclap, Rmath, pcre2 and libsvm.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/vt

--- End Message ---
--- Begin Message ---
Source: vt
Source-Version: 0.57721+ds-1
Done: Antoni Villalonga <antoni@friki.cat>

We believe that the bug you reported is fixed in the latest version of
vt, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 963050@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Antoni Villalonga <antoni@friki.cat> (supplier of updated vt package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Thu, 18 Jun 2020 09:57:21 +0200
Source: vt
Binary: vt vt-dbgsym vt-examples
Architecture: source amd64 all
Version: 0.57721+ds-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Antoni Villalonga <antoni@friki.cat>
Description:
 vt         - toolset for short variant discovery in genetic sequence data
 vt-examples - toolset for short variant discovery in genetic sequence data (exa
Closes: 963050 963051
Changes:
 vt (0.57721+ds-1) unstable; urgency=medium
 .
   * Initial release (Closes: #963050, #963051)
Checksums-Sha1:
 d45e02f68a884e1ade67db24c5bb7a730761843e 2163 vt_0.57721+ds-1.dsc
 8d1f794a59a8497084272acc1d6d6d8e5557c961 18574416 vt_0.57721+ds.orig.tar.xz
 ef40918cb3d875b71ac7be2a08758834629b2ae2 7112 vt_0.57721+ds-1.debian.tar.xz
 9393918d43044db9dfdba80c5bd00fb87d754f7f 30957132 vt-dbgsym_0.57721+ds-1_amd64.deb
 7c8f1bae25a4782170be868031b200e6bf2f2fb7 18358596 vt-examples_0.57721+ds-1_all.deb
 09f31bc5fe52970b73a3f1cfb57ecac4fe6ca899 8503 vt_0.57721+ds-1_amd64.buildinfo
 0fc176952af1277800a2b39003ba8b9318f9664c 750548 vt_0.57721+ds-1_amd64.deb
Checksums-Sha256:
 77928b70f3a47f76d78a409480bc3ee1da60c42f62ce5a514174063bcf280492 2163 vt_0.57721+ds-1.dsc
 ce6e49949e5a61cd8e06ebac2dea1db94e2df78881350aba1cd178a1e4f73865 18574416 vt_0.57721+ds.orig.tar.xz
 a350f5f935a8d0b86986b9a31d9a4fdad97a9c350d11c344f0358e09274fcd83 7112 vt_0.57721+ds-1.debian.tar.xz
 434fdd19bc830504c3bd56aa2301546d19dbc3943e9c6bc584ab4e3c546ad09e 30957132 vt-dbgsym_0.57721+ds-1_amd64.deb
 909d10e4e5596fdf361a5662dfd3f0d009b7c8254d0ce6002d3d85f23874ba51 18358596 vt-examples_0.57721+ds-1_all.deb
 52ddd7724f43997675563bb465a1ddce7079fffc52ae1a98fc55e7fe68e3161f 8503 vt_0.57721+ds-1_amd64.buildinfo
 922723545c96e2532b454fb7a2efa759fd1de468fed66fe99054258cc049812d 750548 vt_0.57721+ds-1_amd64.deb
Files:
 2eee3f3f5f125e1aaf8fbe7fec5813d9 2163 science optional vt_0.57721+ds-1.dsc
 d431231e862dc0adaa30457001f064f0 18574416 science optional vt_0.57721+ds.orig.tar.xz
 edce3716d80367abe204aa636adf5366 7112 science optional vt_0.57721+ds-1.debian.tar.xz
 856bdb5ae1dfbcb2f92b422d77cb9157 30957132 debug optional vt-dbgsym_0.57721+ds-1_amd64.deb
 114f96c249e7ca9086f7d7090f7a4b4c 18358596 science optional vt-examples_0.57721+ds-1_all.deb
 6d399c7517b1868088006c14d080969b 8503 science optional vt_0.57721+ds-1_amd64.buildinfo
 71d5aa6d2da0cf8d3fcb7f22ee8117b3 750548 science optional vt_0.57721+ds-1_amd64.deb

-----BEGIN PGP SIGNATURE-----
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=qlT9
-----END PGP SIGNATURE-----

--- End Message ---

Reply to: