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Bug#958967: marked as done (ITP: r-bioc-dexseq -- Inference of differential exon usage in RNA-Seq)



Your message dated Thu, 11 Jun 2020 10:00:43 +0000
with message-id <E1jjK0p-0005d6-16@fasolo.debian.org>
and subject line Bug#958967: fixed in r-bioc-dexseq 1.32.0+dfsg-1
has caused the Debian Bug report #958967,
regarding ITP: r-bioc-dexseq -- Inference of differential exon usage in RNA-Seq
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
958967: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=958967
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist

Subject: ITP: r-bioc-dexseq -- Inference of differential exon usage in RNA-Seq
Package: wnpp
Owner: Michael R. Crusoe <michael.crusoe@gmail.com>
Severity: wishlist

* Package name    : r-bioc-dexseq
  Version         : 1.32.0
  Upstream Author : Simon Anders <sanders@fs.tum.de> and Alejandro Reyes
* URL             : https://bioconductor.org/packages/DEXSeq/
* License         : GPL-3+
  Programming Lang: GNU R
  Description     : Inference of differential exon usage in RNA-Seq
 The package is focused on finding differential exon usage
 using RNA-seq exon counts between samples with different
 experimental designs. It provides functions that allows the
 user to make the necessary statistical tests based on a model
 that uses the negative binomial distribution to estimate the
 variance between biological replicates and generalized linear
 models for testing. The package also provides functions for the
 visualization and exploration of the results.

Remark: This package is maintained by Debian R Packages Maintainers at
   https://salsa.debian.org/r-pkg-team/r-bioc-dexseq

This package is a precondition for trinityrnaseq 2.10.0

--- End Message ---
--- Begin Message ---
Source: r-bioc-dexseq
Source-Version: 1.32.0+dfsg-1
Done: michael.crusoe@gmail.com (Michael R. Crusoe)

We believe that the bug you reported is fixed in the latest version of
r-bioc-dexseq, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 958967@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe <michael.crusoe@gmail.com> (supplier of updated r-bioc-dexseq package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Mon, 27 Apr 2020 12:03:45 +0200
Source: r-bioc-dexseq
Binary: r-bioc-dexseq
Architecture: source all
Version: 1.32.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By: Michael R. Crusoe <michael.crusoe@gmail.com>
Description:
 r-bioc-dexseq - GNU R inference of differential exon usage in RNA-Seq
Closes: 958967
Changes:
 r-bioc-dexseq (1.32.0+dfsg-1) unstable; urgency=medium
 .
   * Initial release (closes: #958967)
Checksums-Sha1:
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 47cab2c2989e096eaa30695bb50d31f13b5ba13f 2136 r-bioc-dexseq_1.32.0+dfsg-1.debian.tar.xz
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 8d04f1524ab8f558616afc7722f1b45f3f583cd2 13179 r-bioc-dexseq_1.32.0+dfsg-1_amd64.buildinfo
Checksums-Sha256:
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Files:
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 b00263e0fbc3b5b4cf8498677e0f33ac 404620 gnu-r optional r-bioc-dexseq_1.32.0+dfsg-1_all.deb
 eb8c6d5ecb97d4bf2c52253a1a09e8e6 13179 gnu-r optional r-bioc-dexseq_1.32.0+dfsg-1_amd64.buildinfo

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