Bug#958967: ITP: r-bioc-dexseq -- Inference of differential exon usage in RNA-Seq
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-dexseq -- Inference of differential exon usage in RNA-Seq
Package: wnpp
Owner: Michael R. Crusoe <michael.crusoe@gmail.com>
Severity: wishlist
* Package name : r-bioc-dexseq
Version : 1.32.0
Upstream Author : Simon Anders <sanders@fs.tum.de> and Alejandro Reyes
* URL : https://bioconductor.org/packages/DEXSeq/
* License : GPL-3+
Programming Lang: GNU R
Description : Inference of differential exon usage in RNA-Seq
The package is focused on finding differential exon usage
using RNA-seq exon counts between samples with different
experimental designs. It provides functions that allows the
user to make the necessary statistical tests based on a model
that uses the negative binomial distribution to estimate the
variance between biological replicates and generalized linear
models for testing. The package also provides functions for the
visualization and exploration of the results.
Remark: This package is maintained by Debian R Packages Maintainers at
https://salsa.debian.org/r-pkg-team/r-bioc-dexseq
This package is a precondition for trinityrnaseq 2.10.0
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