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Bug#962657: marked as done (ITP: r-bioc-rsubread -- Subread Sequence Alignment and Counting for R)

Your message dated Fri, 24 Jul 2020 14:10:33 +0000
with message-id <E1jyyPB-0005Ht-Fl@fasolo.debian.org>
and subject line Bug#962657: fixed in r-bioc-rsubread 2.2.2-1
has caused the Debian Bug report #962657,
regarding ITP: r-bioc-rsubread -- Subread Sequence Alignment and Counting for R
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
962657: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=962657
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist

Subject: ITP: r-bioc-rsubread -- Subread Sequence Alignment and Counting for R
Package: wnpp
Owner: Steffen Moeller <moeller@debian.org>
Severity: wishlist

* Package name    : r-bioc-rsubread
  Version         : 2.2.2
  Upstream Author : Wei Shi <shi@wehi.edu.au>
* URL             : https://bioconductor.org/packages/Rsubread/
* License         : GPL-3
  Programming Lang: GNU R
  Description     : Subread Sequence Alignment and Counting for R
 Alignment, quantification and analysis of second and third generation
 sequencing data. Includes functionality for read mapping, read counting,
 SNP calling, structural variant detection and gene fusion discovery.
 .
 Can be applied to all major sequencing techologies and to both short
 and long sequence reads.

Remark: This package is maintained by Debian R Packages Maintainers at
   https://salsa.debian.org/r-pkg-team/r-bioc-rsubread

--- End Message ---
--- Begin Message --- 
Source: r-bioc-rsubread
Source-Version: 2.2.2-1
Done: Steffen Moeller <moeller@debian.org>

We believe that the bug you reported is fixed in the latest version of
r-bioc-rsubread, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 962657@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Steffen Moeller <moeller@debian.org> (supplier of updated r-bioc-rsubread package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Thu, 11 Jun 2020 13:44:48 +0200
Source: r-bioc-rsubread
Binary: r-bioc-rsubread r-bioc-rsubread-dbgsym
Architecture: source amd64
Version: 2.2.2-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By: Steffen Moeller <moeller@debian.org>
Description:
 r-bioc-rsubread - Subread Sequence Alignment and Counting for R
Closes: 962657
Changes:
 r-bioc-rsubread (2.2.2-1) unstable; urgency=medium
 .
   * Initial release (closes: #962657)
 .
   * Second upload fixes a missing copyright by Indiana university in
     ./src/HelperFunctions.c - mystery-spotted by FTPadmin Thorsten.
     Many thanks!
 .
     Took this opportunity to change the license from GPL-3 to GPL-3+
     since whenever the GPL-header was put into the source tree, this
     read "or any later version". Informed all three upstream authors
     with a request to clear this up in the DESCRIPTION file as
     GPL (>= 3.0).
Checksums-Sha1:
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 c3b20d6d2e73a217056345ea7af88aaa7e1e0f8a 10826456 r-bioc-rsubread_2.2.2.orig.tar.gz
 d60a7ed9b2aef61b836f8acceac67bbfbc01d0a5 3336 r-bioc-rsubread_2.2.2-1.debian.tar.xz
 9d300504423cd0167228dae24f16cf063697c1d9 1003500 r-bioc-rsubread-dbgsym_2.2.2-1_amd64.deb
 def3d58dce058086ce442cb351d0557a67ed1db6 9899 r-bioc-rsubread_2.2.2-1_amd64.buildinfo
 de3785fb51aa9a549819cb3cc4731cbaa9edade9 7302216 r-bioc-rsubread_2.2.2-1_amd64.deb
Checksums-Sha256:
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 67aa88e4721eb222edec7a517375268d52d3157137df4ab93dfd38a7856050e0 3336 r-bioc-rsubread_2.2.2-1.debian.tar.xz
 476c6023a523785a11f2665eaffd9f9b3b1444b596cd5d0e74ce5d0fd7f99056 1003500 r-bioc-rsubread-dbgsym_2.2.2-1_amd64.deb
 e56835dcab2c541d897ff36c7422a77b853dfe029120ef4e2c3ca2bf6660b2eb 9899 r-bioc-rsubread_2.2.2-1_amd64.buildinfo
 210d65ee9c389f0da1126e8eeefa84ed896dd86cd0ecbcf30ea198c79af4154b 7302216 r-bioc-rsubread_2.2.2-1_amd64.deb
Files:
 ebf963eb07d248d11cf04ff521d97081 2094 gnu-r optional r-bioc-rsubread_2.2.2-1.dsc
 f40ccbd747f340425bdbeb4335a70cda 10826456 gnu-r optional r-bioc-rsubread_2.2.2.orig.tar.gz
 716d9b60662c270364f92b05811ee0d4 3336 gnu-r optional r-bioc-rsubread_2.2.2-1.debian.tar.xz
 b29208915010ec613e788f7287417151 1003500 debug optional r-bioc-rsubread-dbgsym_2.2.2-1_amd64.deb
 2b9f4110280c576033847794c885dfb1 9899 gnu-r optional r-bioc-rsubread_2.2.2-1_amd64.buildinfo
 055d38605eb2b2724cdb97eb1bfe608b 7302216 gnu-r optional r-bioc-rsubread_2.2.2-1_amd64.deb

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--- End Message ---
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