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Bug#922377: marked as done (ITP: sibelia -- comparative genomics tool)

Your message dated Fri, 27 Mar 2020 20:14:58 +0000
with message-id <E1jHvNa-000Hqn-2b@fasolo.debian.org>
and subject line Bug#922377: fixed in sibelia 3.0.7+dfsg-1
has caused the Debian Bug report #922377,
regarding ITP: sibelia -- comparative genomics tool
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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immediately.)


-- 
922377: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=922377
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>

* Package name    : sibelia
  Version         : 3.0.7
  Upstream Author : Saint-Petersburg Academic University
* URL             : http://bioinf.spbau.ru/sibelia
* License         : GPL-2
  Programming Lang: C
  Description     : comparative genomics tool
 Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool:
 It assists biologists in analysing the genomic variations that correlate
 with pathogens, or the genomic changes that help microorganisms adapt in
 different environments. Sibelia will also be helpful for the
 evolutionary and genome rearrangement studies for multiple strains of
 microorganisms.
 .
 Sibelia is useful in finding:
 .
  1) shared regions,
  2) regions that present in one group of genomes but not in others,
  3) rearrangements that transform one genome to other genomes.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/sibelia
The package also contained a binary JAR without source from snpEff.
Since the package is interesting also without the features provided
by this it was removed.  Hopefully snpEff will be packaged successfully
in Buster+1.

--- End Message ---
--- Begin Message --- 
Source: sibelia
Source-Version: 3.0.7+dfsg-1
Done: Andreas Tille <tille@debian.org>

We believe that the bug you reported is fixed in the latest version of
sibelia, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 922377@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated sibelia package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Sun, 26 Jan 2020 21:05:58 +0100
Source: sibelia
Binary: sibelia sibelia-dbgsym sibelia-examples
Architecture: source amd64 all
Version: 3.0.7+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 sibelia    - comparative genomics tool
 sibelia-examples - comparative genomics tool (example data)
Closes: 922377
Changes:
 sibelia (3.0.7+dfsg-1) unstable; urgency=medium
 .
   * Initial release (Closes: #922377)
Checksums-Sha1:
 4b633d2d5bae9108da2d38d87ec958f6d64559fb 2136 sibelia_3.0.7+dfsg-1.dsc
 fab5441d7decc4e9dedbf1169549d85241c132cc 4833128 sibelia_3.0.7+dfsg.orig.tar.xz
 393c00bafa835d6aaa981b0e1494e320f19ea009 10036 sibelia_3.0.7+dfsg-1.debian.tar.xz
 2e02bee6cf3ac6e0b6507547781d560b612c8326 3745304 sibelia-dbgsym_3.0.7+dfsg-1_amd64.deb
 41ebe5b17654908eb439e78cb34b6242447d4785 7704480 sibelia-examples_3.0.7+dfsg-1_all.deb
 5bb6bad8426eb3ae0149a9e1b56ce3edcccb168a 7382 sibelia_3.0.7+dfsg-1_amd64.buildinfo
 d5b27a8945d12b1023fedcec9aff68e4edfb4c95 319188 sibelia_3.0.7+dfsg-1_amd64.deb
Checksums-Sha256:
 f8b2f4ec8af47362c12a2fa49c26fa06daab2a797a85bc0ab41d34ea8dc8376e 2136 sibelia_3.0.7+dfsg-1.dsc
 d4dd618fe9f373be8ad90f9b1d670ac8e45a7386d67e28b0d055e1d77f9d7caa 4833128 sibelia_3.0.7+dfsg.orig.tar.xz
 5cea5b99f3cb248625ad655d823f70db1a5f90b262383e904ea3a7dfcc928d7d 10036 sibelia_3.0.7+dfsg-1.debian.tar.xz
 481a5361135fa4d326703fe137145e87f292a8f7d081dbc5dae21fa3461346a3 3745304 sibelia-dbgsym_3.0.7+dfsg-1_amd64.deb
 9b44074135d2b040c834046ef234dec49b0d8c67281c4fc6ee1525b62bdff30a 7704480 sibelia-examples_3.0.7+dfsg-1_all.deb
 36c489b959c69a2ae9e78a149054cf6055ae43e33d6a868c83d1242385729fc2 7382 sibelia_3.0.7+dfsg-1_amd64.buildinfo
 2c8fac24e0e6741a1624fe92288fc2fcb41f05410a691ada32be50b2f5f265c5 319188 sibelia_3.0.7+dfsg-1_amd64.deb
Files:
 301e4a8a074ca918a2421f970da32566 2136 science optional sibelia_3.0.7+dfsg-1.dsc
 38311be6d2eee4d5e4d4a8ccf2d9c85e 4833128 science optional sibelia_3.0.7+dfsg.orig.tar.xz
 28d225e3325f1bddb4c214bd761d260e 10036 science optional sibelia_3.0.7+dfsg-1.debian.tar.xz
 e5a22b104a40bb1ffb815e75c7f461bb 3745304 debug optional sibelia-dbgsym_3.0.7+dfsg-1_amd64.deb
 3b2d7c3b6d62f77966249f0b9dcc0b24 7704480 science optional sibelia-examples_3.0.7+dfsg-1_all.deb
 84fe185289a00d3ba34f08bc000bdde3 7382 science optional sibelia_3.0.7+dfsg-1_amd64.buildinfo
 84cadd2f98a5881e4cf93054f8c4ee38 319188 science optional sibelia_3.0.7+dfsg-1_amd64.deb

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--- End Message ---
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