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Bug#945241: marked as done (ITP: libbio-db-hts-perl -- Perl interface to the HTS library)



Your message dated Tue, 10 Dec 2019 09:00:11 +0000
with message-id <E1iebNL-0002aq-Q0@fasolo.debian.org>
and subject line Bug#945241: fixed in libbio-db-hts-perl 3.01-1
has caused the Debian Bug report #945241,
regarding ITP: libbio-db-hts-perl -- Perl interface to the HTS library
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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-- 
945241: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=945241
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist

Subject: ITP: libbio-db-hts-perl -- Perl interface to the HTS library
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist

* Package name    : libbio-db-hts-perl
  Version         : 3.01
  Upstream Author : EMBL-European Bioinformatics Institute
* URL             : https://metacpan.org/release/Bio-DB-HTS
* License         : Apache-2.0
  Programming Lang: C
  Description     : Perl interface to the HTS library
 HTSlib is an implementation of a unified C library for accessing common file
 formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call
 Format), used for high-throughput sequencing data, and is the core library
 used by samtools and bcftools. HTSlib only depends on zlib. It is known to be
 compatible with gcc, g++ and clang.
 .
 HTSlib implements a generalized BAM (binary SAM) index, with file extension
 'csi' (coordinate-sorted index). The HTSlib file reader first looks for the
 new index and then for the old if the new index is absent.
 .
 This package provides a Perl interface to the HTS library.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/libbio-db-hts-perl

--- End Message ---
--- Begin Message ---
Source: libbio-db-hts-perl
Source-Version: 3.01-1

We believe that the bug you reported is fixed in the latest version of
libbio-db-hts-perl, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 945241@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated libbio-db-hts-perl package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Thu, 21 Nov 2019 19:08:04 +0100
Source: libbio-db-hts-perl
Binary: libbio-db-hts-perl
Architecture: source amd64
Version: 3.01-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 libbio-db-hts-perl - Perl interface to the HTS library
Closes: 945241
Changes:
 libbio-db-hts-perl (3.01-1) unstable; urgency=medium
 .
   * Initial release (Closes: #945241)
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Files:
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--- End Message ---

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