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Bug#922703: marked as done (ITP: kma -- mapping genomic sequences to raw reads directly against redundant databases)



Your message dated Sat, 30 Mar 2019 00:00:11 +0000
with message-id <E1hA1Pv-000HNn-Bh@fasolo.debian.org>
and subject line Bug#922703: fixed in kma 1.1.7-1
has caused the Debian Bug report #922703,
regarding ITP: kma -- mapping genomic sequences to raw reads directly against redundant databases
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
922703: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=922703
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>

* Package name    : kma
  Version         : 1.1.7
  Upstream Author : , Philip Clausen, Technical University of Denmark
* URL             : https://bitbucket.org/genomicepidemiology/kma
* License         : Apache-2.0
  Programming Lang: C
  Description     : mapping genomic sequences to raw reads directly against redundant databases
 KMA is mapping a method designed to map raw reads directly against
 redundant databases, in an ultra-fast manner using seed and extend. KMA
 is particularly good at aligning high quality reads against highly
 redundant databases, where unique matches often does not exist. It works
 for long low quality reads as well, such as those from Nanopore. Non-
 unique matches are resolved using the "ConClave" sorting scheme, and a
 consensus sequence are outputtet in addition to other common attributes.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/kma

--- End Message ---
--- Begin Message ---
Source: kma
Source-Version: 1.1.7-1

We believe that the bug you reported is fixed in the latest version of
kma, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 922703@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated kma package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 19 Feb 2019 18:24:41 +0100
Source: kma
Binary: kma
Architecture: source amd64
Version: 1.1.7-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 kma        - mapping genomic sequences to raw reads directly against redundant
Closes: 922703
Changes:
 kma (1.1.7-1) unstable; urgency=medium
 .
   * Initial release (Closes: #922703)
Checksums-Sha1:
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 97003d28f426da129b6a6789e6489eeea4b81551 359685 kma_1.1.7.orig.tar.bz2
 92def6630e9179413df1c46b9397b7d26f4dc488 4356 kma_1.1.7-1.debian.tar.xz
 44270f6d86f34a6a6a08982c04ab39a71262d59b 353016 kma-dbgsym_1.1.7-1_amd64.deb
 c0d297e689b81af92e1073f2a4194ab9a25b7acf 5651 kma_1.1.7-1_amd64.buildinfo
 a3f5fa304f24da07ff9ba8b985740c33bf9b60da 145676 kma_1.1.7-1_amd64.deb
Checksums-Sha256:
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 bc0b38677a411beff5fb44a38740b70dbd6dda9b6f33af7b2de4d7a4a190fe6e 359685 kma_1.1.7.orig.tar.bz2
 0f5aa627fdb07b1d4451dffc3aa24d108ca9d7760e7b344289b4f1846adff9b5 4356 kma_1.1.7-1.debian.tar.xz
 85c7e75633d755dd16f820ec8e01b2db21417f2edbd71352df1a8eca5562dc7e 353016 kma-dbgsym_1.1.7-1_amd64.deb
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 91ed157d487907a0e9f88d35a39dca160a4bfe72e2dd1171f7a0a6d4b9295f9f 145676 kma_1.1.7-1_amd64.deb
Files:
 0c782fcc7bc84f49a369fcadd27e1d03 1902 science optional kma_1.1.7-1.dsc
 66de6f5efb6e836f061d716af3aed992 359685 science optional kma_1.1.7.orig.tar.bz2
 05d69fd505591c1c56bfef0e92d0cb1f 4356 science optional kma_1.1.7-1.debian.tar.xz
 78099b5f472576162906e9b10d01a199 353016 debug optional kma-dbgsym_1.1.7-1_amd64.deb
 8ecc4912b38db6209ea1932b3cb6d76c 5651 science optional kma_1.1.7-1_amd64.buildinfo
 18b0193f63e5a914b47a91fbaf36f587 145676 science optional kma_1.1.7-1_amd64.deb

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