Bug#855597: marked as done (RFP: phyx -- phylogenetic analyses on trees and sequences for UNIX)
Your message dated Sun, 09 Sep 2018 14:10:34 +0000
with message-id <E1fz0Q6-000F2h-QS@fasolo.debian.org>
and subject line Bug#855597: fixed in phyx 0.99+ds-1
has caused the Debian Bug report #855597,
regarding RFP: phyx -- phylogenetic analyses on trees and sequences for UNIX
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
855597: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=855597
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
- To: Debian Bug Tracking System <submit@bugs.debian.org>
- Subject: ITP: phyx -- phylogenetic analyses on trees and sequences for UNIX
- From: Afif Elghraoui <afif@debian.org>
- Date: Mon, 20 Feb 2017 08:14:30 -0800
- Message-id: <20170220161430.9738.5104.reportbug@afif-1215B>
Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
* Package name : phyx
Version : 0.99
Upstream Author : Joseph W. Brown, Joseph F. Walker, and Stephen A. Smith
* URL : https://github.com/FePhyFoFum/phyx
* License : GPL
Programming Lang: C++
Description : phylogenetic analyses on trees and sequences for UNIX
phyx provides a convenient, lightweight and inclusive toolkit consisting of
programs spanning the wide breadth of programs utilized by researchers
performing phylogenomic analyses. Modeled after Unix/GNU/Linux command
line tools, individual programs perform a single task and operate on
standard I/O streams. A result of this stream-centric approach is that, for
most programs, only a single sequence or tree is in memory at any moment.
Thus, large datasets can be processed with minimal memory requirements.
phyx’s ever-growing complement of programs consists of over 35 programs
focused on exploring, manipulating, analyzing and simulating phylogenetic
objects (alignments, trees and MCMC logs). As with standard Unix command
line tools, these programs can be piped (together with non-phyx tools),
allowing the easy construction of efficient analytical pipelines.
This package will be maintained by the Debian Med team.
--- End Message ---
--- Begin Message ---
Source: phyx
Source-Version: 0.99+ds-1
We believe that the bug you reported is fixed in the latest version of
phyx, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 855597@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated phyx package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 08 Sep 2018 22:16:39 +0200
Source: phyx
Binary: phyx
Architecture: source amd64
Version: 0.99+ds-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
phyx - UNIX-style phylogenetic analyses on trees and sequences
Closes: 855597
Changes:
phyx (0.99+ds-1) unstable; urgency=medium
.
* Initial release (Closes: #855597)
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