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Bug#911964: marked as done (ITP: plasmidseeker -- identification of known plasmids from whole-genome sequencing reads)



Your message dated Thu, 22 Nov 2018 13:00:33 +0000
with message-id <E1gPoav-0006bF-3l@fasolo.debian.org>
and subject line Bug#911964: fixed in plasmidseeker 1.0+dfsg-1
has caused the Debian Bug report #911964,
regarding ITP: plasmidseeker -- identification of known plasmids from whole-genome sequencing reads
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
911964: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=911964
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>

* Package name    : plasmidseeker
  Version         : 1.0
  Upstream Author : Bioinfo, IMCB, UT
* URL             : https://github.com/bioinfo-ut/PlasmidSeeker
* License         : BSD-3-clause
  Programming Lang: Perl
  Description     : identification of known plasmids from whole-genome sequencing reads
 PlasmidSeeker is a k-mer based program for the identification of known
 plasmids from bacterial whole genome sequencing reads.
 .
 PlasmidSeeker that enables the detection of plasmids from bacterial WGS
 data without read assembly. The PlasmidSeeker algorithm is based on
 k-mers and uses k-mer abundance to distinguish between plasmid and
 bacterial sequences. The performance of PlasmidSeeker was tested on a set
 of simulated and real bacterial WGS samples, resulting in 100%
 sensitivity and 99.98% specificity.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/plasmidseeker

--- End Message ---
--- Begin Message ---
Source: plasmidseeker
Source-Version: 1.0+dfsg-1

We believe that the bug you reported is fixed in the latest version of
plasmidseeker, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 911964@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated plasmidseeker package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Fri, 26 Oct 2018 20:07:34 +0200
Source: plasmidseeker
Binary: plasmidseeker
Architecture: source amd64
Version: 1.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 plasmidseeker - identification of known plasmids from whole-genome sequencing rea
Closes: 911964
Changes:
 plasmidseeker (1.0+dfsg-1) unstable; urgency=medium
 .
   * Initial release (Closes: #911964)
Checksums-Sha1:
 059a2a4402fb55dbd364314847f8860472dd816f 2013 plasmidseeker_1.0+dfsg-1.dsc
 686a7464de473904479f873244013eecb9541587 22396 plasmidseeker_1.0+dfsg.orig.tar.xz
 1e0eef31f9fa05f528ed10201a79d25ddb24a8cf 4560 plasmidseeker_1.0+dfsg-1.debian.tar.xz
 edae67869c6d96966a4085b10d7d1dcdb792199f 5582 plasmidseeker_1.0+dfsg-1_amd64.buildinfo
 32816a1407f7acc7ad0078b20a75ae8d75e9db77 24444 plasmidseeker_1.0+dfsg-1_amd64.deb
Checksums-Sha256:
 42a8a8b5af3bc6fc75cd7661e031cca5ad23aa0f0a995aaad250d699dd2c544c 2013 plasmidseeker_1.0+dfsg-1.dsc
 eb6127f1940fce2bbcec3a20b56c8e5e3acf327a14c04531f0b96c87edf518aa 22396 plasmidseeker_1.0+dfsg.orig.tar.xz
 3bb1bfb9c60cf9469e4975db5c9aeacd85d17228eb112cc632b6c2598b02e0a1 4560 plasmidseeker_1.0+dfsg-1.debian.tar.xz
 8ca4e6f70da5078416073e6d00e6e0ba17d72ec99423c87b7f2708c74abb4214 5582 plasmidseeker_1.0+dfsg-1_amd64.buildinfo
 fb8da428f01c9cba1b59665ed07d1ff15b7ce9c6496c8be826d75eb2519f8144 24444 plasmidseeker_1.0+dfsg-1_amd64.deb
Files:
 2f0daf18ab30212e28a22b5600b17ab7 2013 science optional plasmidseeker_1.0+dfsg-1.dsc
 9ffa88aa2d7d834cf1fda1f110230311 22396 science optional plasmidseeker_1.0+dfsg.orig.tar.xz
 66d16813f6aa0765091604f965f5fa29 4560 science optional plasmidseeker_1.0+dfsg-1.debian.tar.xz
 1df0d219758a6e32174d5cc812041bd9 5582 science optional plasmidseeker_1.0+dfsg-1_amd64.buildinfo
 14f205d6327cf5baf847822fd790a70a 24444 science optional plasmidseeker_1.0+dfsg-1_amd64.deb

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--- End Message ---

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