Bug#890220: ITP: assemblytics -- detect and analyze structural variants from a genome assembly
Package: wnpp
Owner: Afif Elghraoui <afif@debian.org>
Severity: wishlist
* Package name : assemblytics
Version : 0~20170131
Upstream Author : Maria Nattestad <mnattest@cshl.edu>
* URL : http://assemblytics.com
* License : MIT
Programming Lang: Python, R
Description : detect and analyze structural variants from a genome
assembly
Assemblytics incorporates a unique anchor filtering approach to increase
robustness to repetitive elements, and identifies six classes of variants
based on their distinct alignment signatures. Assemblytics can be applied
both to comparing aberrant genomes, such as human cancers, to a reference,
or to identify differences between related species.
This will be maintained by Debian Med.
--
Afif Elghraoui | عفيف الغراوي
http://afif.ghraoui.name
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