Bug#846663: marked as done (ITP: pybigwig -- module for quick access to bigBed and bigWig files)
Your message dated Mon, 19 Dec 2016 20:00:14 +0000
with message-id <E1cJ46Y-000Crd-HP@fasolo.debian.org>
and subject line Bug#846663: fixed in pybigwig 0.3.2-1
has caused the Debian Bug report #846663,
regarding ITP: pybigwig -- module for quick access to bigBed and bigWig files
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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846663: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=846663
Debian Bug Tracking System
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Diane Trout <diane@ghic.org>
* Package name : pybigwig
Version : 0.3.2
Upstream Author : Devon Ryan <ryan@ie-freiburg.mpg.de>
* URL : https://github.com/dpryan79/pyBigWig
* License : Expat
Programming Lang: Python
Description : module for quick access to bigBed and bigWig files
This is a Python extension, written in C, for quick access to bigBed files,
and access to and creation of bigWig files.
I was planning on submitting this under the debian-med team.
We found it as a dependency for deepTools https://deeptools.github.io/
though I haven't investigated packaging deepTools.
bigBed and bigWig files are quite common in bioinformatics, it'd be nice to be
able to use them directly.
The one odd thing about the package is that upstream has the C code seperately
available to build a library, but they also includes directly include in their
python package and just add the C code to the setup.py code to build the
extension.
--- End Message ---
--- Begin Message ---
Source: pybigwig
Source-Version: 0.3.2-1
We believe that the bug you reported is fixed in the latest version of
pybigwig, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 846663@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Diane Trout <diane@ghic.org> (supplier of updated pybigwig package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 29 Nov 2016 17:01:56 -0800
Source: pybigwig
Binary: python-pybigwig python3-pybigwig
Architecture: source amd64
Version: 0.3.2-1
Distribution: unstable
Urgency: medium
Maintainer: Diane Trout <diane@ghic.org>
Changed-By: Diane Trout <diane@ghic.org>
Description:
python-pybigwig - Python 2 module for quick access to bigBed and bigWig files
python3-pybigwig - Python 3 module for quick access to bigBed and bigWig files
Closes: 846663
Changes:
pybigwig (0.3.2-1) unstable; urgency=medium
.
* Initial release. (Closes: #846663)
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