Bug#838020: marked as done (ITP: libvcflib -- C++ library for parsing and manipulating VCF files)
Your message dated Wed, 21 Sep 2016 13:00:11 +0000
with message-id <E1bmh8F-0001gD-UQ@franck.debian.org>
and subject line Bug#838020: fixed in libvcflib 1.0.0~rc1+dfsg-1
has caused the Debian Bug report #838020,
regarding ITP: libvcflib -- C++ library for parsing and manipulating VCF files
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)
--
838020: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=838020
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : libvcflib
Version : 1.0.0~rc1
Upstream Author : Erik Garrison <erik.garrison@bc.edu>
* URL : https://github.com/ekg/vcflib
* License : MIT
Programming Lang: C++
Description : C++ library for parsing and manipulating VCF files
The Variant Call Format (VCF) is a flat-file, tab-delimited textual format
intended to concisely describe reference-indexed variations between
individuals. VCF provides a common interchange format for the description of
variation in individuals and populations of samples, and has become the defacto
standard reporting format for a wide array of genomic variant detectors.
.
vcflib provides methods to manipulate and interpret sequence variation as it
can be described by VCF. It is both:
.
* an API for parsing and operating on records of genomic variation as it can
be described by the VCF format,
* and a collection of command-line utilities for executing complex
manipulations on VCF files.
Remark: This library is a precondition for the Debian Med target freebayes.
It will be maintained at
https://anonscm.debian.org/git/debian-med/libvcflib.git
--- End Message ---
--- Begin Message ---
Source: libvcflib
Source-Version: 1.0.0~rc1+dfsg-1
We believe that the bug you reported is fixed in the latest version of
libvcflib, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 838020@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated libvcflib package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 16 Sep 2016 15:52:29 +0200
Source: libvcflib
Binary: libvcflib1 libvcflib-dev libvcflib-tools
Architecture: source amd64
Version: 1.0.0~rc1+dfsg-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libvcflib-dev - C++ library for parsing and manipulating VCF files (development)
libvcflib-tools - C++ library for parsing and manipulating VCF files (tools)
libvcflib1 - C++ library for parsing and manipulating VCF files
Closes: 838020
Changes:
libvcflib (1.0.0~rc1+dfsg-1) unstable; urgency=low
.
* Initial release (Closes: #838020)
Checksums-Sha1:
491f71c1e4ff0a530d45ff3ff952cda7b11a3e82 2239 libvcflib_1.0.0~rc1+dfsg-1.dsc
e088d0c931e1a7e01a5d4b2fd4095f21b8ea9b66 6605868 libvcflib_1.0.0~rc1+dfsg.orig.tar.xz
ddc56205242811c501d705898be2f6302e48b218 10060 libvcflib_1.0.0~rc1+dfsg-1.debian.tar.xz
d668947932c0b5a1c8a7e8612aec34a1c1935fa1 17584 libvcflib-dev_1.0.0~rc1+dfsg-1_amd64.deb
998d7b8763cff197b21f48727076574f7267f57a 81410 libvcflib-tools-dbgsym_1.0.0~rc1+dfsg-1_amd64.deb
7c0c24b8dde63a456aff80162401f677c8917f04 603492 libvcflib-tools_1.0.0~rc1+dfsg-1_amd64.deb
75010f0e3830e08d9cda603193dd9ac1de70dbb4 884148 libvcflib1-dbgsym_1.0.0~rc1+dfsg-1_amd64.deb
9b13fe17a3214798d90ab5770c3643ad28e4e148 138398 libvcflib1_1.0.0~rc1+dfsg-1_amd64.deb
Checksums-Sha256:
0901f0d446bf208f10939acc9b3c25325f8f98c6db25ff13f7ad7b038cd05553 2239 libvcflib_1.0.0~rc1+dfsg-1.dsc
29c6c1a3ddb78e06f6d2bd6a245ce23ae56e14c9e4648d7d49e2a5d9f85041ee 6605868 libvcflib_1.0.0~rc1+dfsg.orig.tar.xz
eb7addf9bd01fbf3ed002c3ba3032c10db49d0f199cc8de4bc24c73bd3a97004 10060 libvcflib_1.0.0~rc1+dfsg-1.debian.tar.xz
9fba1f26522f5fdfa54345e3e31c65fac688fdfad900614e8c5c37446768157c 17584 libvcflib-dev_1.0.0~rc1+dfsg-1_amd64.deb
fa8492cb427df80e0f51ae7f783d0304daf64796a44f1c2665be34224abfc2e6 81410 libvcflib-tools-dbgsym_1.0.0~rc1+dfsg-1_amd64.deb
b03778a4a414340633c57cab799b093b2234ff506603d486b79210f3e5b703d5 603492 libvcflib-tools_1.0.0~rc1+dfsg-1_amd64.deb
d1ec269ee7ff69ceb225564b8a22b8649d9415a60bedb50bbc6f0f81e96fcabb 884148 libvcflib1-dbgsym_1.0.0~rc1+dfsg-1_amd64.deb
0d584639346fe4cc6995635203592da8c48121fc71b57d07e8c5861d1c69f68b 138398 libvcflib1_1.0.0~rc1+dfsg-1_amd64.deb
Files:
3d2487d6ee2f10665df3e6533c977dc0 2239 science optional libvcflib_1.0.0~rc1+dfsg-1.dsc
2cbf12108624fc9729d2f477c51d8d86 6605868 science optional libvcflib_1.0.0~rc1+dfsg.orig.tar.xz
61f27d67a167934b8809bbb306a9acff 10060 science optional libvcflib_1.0.0~rc1+dfsg-1.debian.tar.xz
64dcced72d5ff4ad90f7db84c421faa4 17584 libdevel optional libvcflib-dev_1.0.0~rc1+dfsg-1_amd64.deb
3572faf4d091c3a199be28a0acedf157 81410 debug extra libvcflib-tools-dbgsym_1.0.0~rc1+dfsg-1_amd64.deb
aa1741a4ef3b684c07c73467382f7337 603492 science optional libvcflib-tools_1.0.0~rc1+dfsg-1_amd64.deb
71baaddfed8c1c8cc7196bf4608ff7ac 884148 debug extra libvcflib1-dbgsym_1.0.0~rc1+dfsg-1_amd64.deb
865ddcecd0f09717273f6ad959d8aacc 138398 libs optional libvcflib1_1.0.0~rc1+dfsg-1_amd64.deb
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1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=EuS9
-----END PGP SIGNATURE-----
--- End Message ---
Reply to: