Bug#831781: marked as done (ITP: mash -- fast genome and metagenome distance estimation using MinHash)
Your message dated Thu, 21 Jul 2016 11:00:12 +0000
with message-id <E1bQBi8-0004te-21@franck.debian.org>
and subject line Bug#831781: fixed in mash 1.1-1
has caused the Debian Bug report #831781,
regarding ITP: mash -- fast genome and metagenome distance estimation using MinHash
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
831781: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=831781
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss <satta@debian.org>
* Package name : mash
Version : 1.1
Upstream Author : Brian Ondov, Todd Treangen, Sergey Koren, and Adam Phillippy <adam.phillippy@nih.gov>
* URL : https://mash.readthedocs.io
* License : BSD
Programming Lang: C++
Description : fast genome and metagenome distance estimation using MinHash
Mash uses MinHash locality-sensitive hashing to reduce large biosequences to
a representative sketch and rapidly estimate pairwise distances between
genomes or metagenomes. Mash sketch databases effectively delineate known
species boundaries, allow construction of approximate phylogenies, and can be
searched in seconds using assembled genomes or raw sequencing runs from
Illumina, Pacific Biosciences, and Oxford Nanopore.
For metagenomics, Mash scales to thousands of samples and can replicate Human
Microbiome Project and Global Ocean Survey results in a fraction of the time.
This package will be maintained within the Debian Med Packaging Team.
--- End Message ---
--- Begin Message ---
Source: mash
Source-Version: 1.1-1
We believe that the bug you reported is fixed in the latest version of
mash, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 831781@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Sascha Steinbiss <satta@debian.org> (supplier of updated mash package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Tue, 19 Jul 2016 20:10:04 +0000
Source: mash
Binary: mash libmash-dev mash-doc
Architecture: source amd64 all
Version: 1.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <satta@debian.org>
Description:
libmash-dev - development headers and static library for Mash
mash - fast genome and metagenome distance estimation using MinHash
mash-doc - documentation for Mash
Closes: 831781
Changes:
mash (1.1-1) unstable; urgency=medium
.
* Initial release (Closes: #831781)
Checksums-Sha1:
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Files:
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62c70bbcd1776ed1c91b39ad1520b0d2 4661595 science optional mash_1.1.orig.tar.gz
009235d7ed2793f28f6bd4932e99ed80 2156952 science optional mash_1.1-1.debian.tar.xz
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83056d44abe2968dc4dd56e8be47dd57 71746 doc optional mash-doc_1.1-1_all.deb
5304a0ac641a0baad0014c733a5b44be 166058 science optional mash_1.1-1_amd64.deb
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