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Bug#828850: marked as done (ITP: r-bioc-deseq2 -- R package for RNA-Seq Differential Expression Analysis)



Your message dated Thu, 30 Jun 2016 18:00:31 +0000
with message-id <E1bIgGN-0000tO-QI@franck.debian.org>
and subject line Bug#828850: fixed in r-bioc-deseq2 1.12.3-1
has caused the Debian Bug report #828850,
regarding ITP: r-bioc-deseq2 -- R package for RNA-Seq Differential Expression Analysis
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
828850: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=828850
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Debian Med team <debian-med@lists.debian.org>

* Package name    : r-bioc-deseq2
  Version         : 1.12.3
  Upstream Author : Michael Love <michaelisaiahlove@gmail.com>
* URL             : https://bioconductor.org/packages/DESeq2
* License         : LGPL-3+
  Programming Lang: R
  Description     : R package for RNA-Seq Differential Expression Analysis

Differential gene expression analysis based on the negative binomial
distribution. Estimate variance-mean dependence in count data from
high-throughput sequencing assays and test for differential expression based
on a model using the negative binomial distribution.

Popular bioinformatics tool/library; team maintained by Debian Med

--- End Message ---
--- Begin Message ---
Source: r-bioc-deseq2
Source-Version: 1.12.3-1

We believe that the bug you reported is fixed in the latest version of
r-bioc-deseq2, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 828850@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe <michael.crusoe@gmail.com> (supplier of updated r-bioc-deseq2 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Mon, 27 Jun 2016 13:42:38 -0700
Source: r-bioc-deseq2
Binary: r-bioc-deseq2
Architecture: source amd64
Version: 1.12.3-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <michael.crusoe@gmail.com>
Description:
 r-bioc-deseq2 - R package for RNA-Seq Differential Expression Analysis
Closes: 828850
Changes:
 r-bioc-deseq2 (1.12.3-1) unstable; urgency=medium
 .
   * Initial release (Closes: #828850)
Checksums-Sha1:
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 05500d7a293d2613514a14533eeaf743c4f611cf 1324782 r-bioc-deseq2_1.12.3.orig.tar.gz
 62d9ba568726636893069649a031098f917a4a00 5956 r-bioc-deseq2_1.12.3-1.debian.tar.xz
 c21adf8732d1d86fd31963390de9a9405645b119 558352 r-bioc-deseq2-dbgsym_1.12.3-1_amd64.deb
 b6df4194c5f145aba81eb215288c8a8680be5d46 1547678 r-bioc-deseq2_1.12.3-1_amd64.deb
Checksums-Sha256:
 3fe57aac1e62c42560e72277bfc483ab81818b2c1dd1bc2055656bfcf60a18a3 2236 r-bioc-deseq2_1.12.3-1.dsc
 03bb9ad96f783c29c5385db9299067c1a721a771a6d023c51f117b665a08e61b 1324782 r-bioc-deseq2_1.12.3.orig.tar.gz
 341a107ca5ae1e4bebc6b9cedecf22e45b7fcedfb40e6560829d6a9caf0f9087 5956 r-bioc-deseq2_1.12.3-1.debian.tar.xz
 eaa7274981ed23f1c6be28503e066cec4a684d04f8832da613781d46551d2400 558352 r-bioc-deseq2-dbgsym_1.12.3-1_amd64.deb
 57f3242166797d9893aac6708149c20c89b0a95e431cfbaa8d61fd772ed895c0 1547678 r-bioc-deseq2_1.12.3-1_amd64.deb
Files:
 d358f4e4418fec4c3e34ca01962c0ecb 2236 gnu-r optional r-bioc-deseq2_1.12.3-1.dsc
 05913ad6ba6bc8b5b73e3b107fd53b1d 1324782 gnu-r optional r-bioc-deseq2_1.12.3.orig.tar.gz
 d3d24a70dd67ab95bcde87d6237293af 5956 gnu-r optional r-bioc-deseq2_1.12.3-1.debian.tar.xz
 2dcf23b3ae55656128c28f407a92becf 558352 debug extra r-bioc-deseq2-dbgsym_1.12.3-1_amd64.deb
 050bf0b6a5baadac925e743d4797f6f1 1547678 gnu-r optional r-bioc-deseq2_1.12.3-1_amd64.deb

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