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Bug#825906: marked as done (ITP: r-bioc-ensembldb -- GNU R utilities to create and use an Ensembl based annotation database)



Your message dated Mon, 27 Jun 2016 08:02:15 +0000
with message-id <E1bHRUl-0001dc-LL@franck.debian.org>
and subject line Bug#825906: fixed in r-bioc-ensembldb 1.4.6-1
has caused the Debian Bug report #825906,
regarding ITP: r-bioc-ensembldb -- GNU R utilities to create and use an Ensembl based annotation database
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
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immediately.)


-- 
825906: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=825906
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>

* Package name    : r-bioc-ensembldb
  Version         : 1.4.3
  Upstream Author : Johannes Rainer <johannes.rainer@eurac.edu>
* URL             : http://bioconductor.org/packages/release/bioc/html/ensembldb.html
* License         : LGPL
  Programming Lang: GNU R
  Description     : GNU R utilities to create and use an Ensembl based annotation database
 The package provides functions to create and use transcript centric
 annotation databases/packages. The annotation for the databases are
 directly fetched from Ensembl using their Perl API. The functionality
 and data is similar to that of the TxDb packages from the
 GenomicFeatures package, but, in addition to retrieve all
 gene/transcript models and annotations from the database, the ensembldb
 package provides also a filter framework allowing to retrieve
 annotations for specific entries like genes encoded on a chromosome
 region or transcript models of lincRNA genes.


Remark: This package is needed to upgrade other r-bioc-* packages and
will be maintained by the Debian Med team at
    svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-ensembldb/trunk/

--- End Message ---
--- Begin Message ---
Source: r-bioc-ensembldb
Source-Version: 1.4.6-1

We believe that the bug you reported is fixed in the latest version of
r-bioc-ensembldb, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 825906@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated r-bioc-ensembldb package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 31 May 2016 11:41:29 +0200
Source: r-bioc-ensembldb
Binary: r-bioc-ensembldb
Architecture: source all
Version: 1.4.6-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 r-bioc-ensembldb - GNU R utilities to create and use an Ensembl based annotation dat
Closes: 825906
Changes:
 r-bioc-ensembldb (1.4.6-1) unstable; urgency=low
 .
   * Initial release (closes: #825906)
Checksums-Sha1:
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 a2de5fb8f57c74785bb135af27bdaa7311d0929d 1230289 r-bioc-ensembldb_1.4.6.orig.tar.gz
 03f319b069ff76521e1cc0d81d60527e726328ad 3888 r-bioc-ensembldb_1.4.6-1.debian.tar.xz
 58779d3f0860c7a2fc306944f168b7aa4f05e729 1006142 r-bioc-ensembldb_1.4.6-1_all.deb
Checksums-Sha256:
 6e75966dee572df2e0236d964167413593cd59274b7f101fd1509d0be4d0ddb8 2154 r-bioc-ensembldb_1.4.6-1.dsc
 262277d32d0a28838ffac8792ef2d0c80d54ca35d9c80ec59c09e015ecd6db54 1230289 r-bioc-ensembldb_1.4.6.orig.tar.gz
 4739adbd40217363c09513c0f201def86cd224920132a6acaef760e4cfaebaa3 3888 r-bioc-ensembldb_1.4.6-1.debian.tar.xz
 8ef5c30847994a1da34dea01a432b05691d6adca6218d9cdaadb003decd03d1c 1006142 r-bioc-ensembldb_1.4.6-1_all.deb
Files:
 69e99005c0b0f20926b5e9daa250726e 2154 gnu-r optional r-bioc-ensembldb_1.4.6-1.dsc
 3a010fdb7572c850050d6de372180a0a 1230289 gnu-r optional r-bioc-ensembldb_1.4.6.orig.tar.gz
 51de7d3e17a3ace62f31d445553c38e2 3888 gnu-r optional r-bioc-ensembldb_1.4.6-1.debian.tar.xz
 5bbdbaff59bd474725c128cc88aae033 1006142 gnu-r optional r-bioc-ensembldb_1.4.6-1_all.deb

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