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Bug#787739: marked as done (ITP: plip -- fully automated protein-ligand interaction profiler)



Your message dated Fri, 25 Mar 2016 18:00:29 +0000
with message-id <E1ajW29-0006ul-Hd@franck.debian.org>
and subject line Bug#787739: fixed in plip 1.3.0a+dfsg-1
has caused the Debian Bug report #787739,
regarding ITP: plip -- fully automated protein-ligand interaction profiler
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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immediately.)


-- 
787739: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=787739
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Alexandre Mestiashvili <alex@biotec.tu-dresden.de>

* Package name    : plip
  Version         : 1.1.0
  Upstream Author : Sebastian Salentin <sebastian.salentin@biotec.tu-dresden.de>
* URL             : https://github.com/ssalentin/plip
* License         : Apache-2.0
  Programming Lang: Python
  Description     : fully automated protein-ligand interaction profiler

 The Protein-Ligand Interaction Profiler (PLIP) is a tool to analyze 
 and visualize protein-ligand interactions in PDB files.
 Features include:
  * Detection of eight different types of noncovalent interactions
  * Automatic detection of relevant ligands in a PDB file
  * Direct download of PDB structures from wwPDB server if valid 
    PDB ID is given
  * Processing of custom PDB files containing protein-ligand complexes 
    (e.g. from docking)
  * No need for special preparation of a PDB file, works out of the box
  * Atom-level interaction reports in rST and XML formats for easy parsing
  * Generation of PyMOL session files (.pse) for each pairing, enabling easy 
    preparation of images for publications and talks
  * Rendering of preview image for each ligand and its interactions 
    with the protein

 The package will be team maintained by the Debian Med team.

--- End Message ---
--- Begin Message ---
Source: plip
Source-Version: 1.3.0a+dfsg-1

We believe that the bug you reported is fixed in the latest version of
plip, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 787739@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Alexandre Mestiashvili <alex@biotec.tu-dresden.de> (supplier of updated plip package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Thu, 24 Mar 2016 13:39:29 +0100
Source: plip
Binary: plip
Architecture: source all
Version: 1.3.0a+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Alexandre Mestiashvili <alex@biotec.tu-dresden.de>
Description:
 plip       - fully automated protein-ligand interaction profiler
Closes: 787739
Changes:
 plip (1.3.0a+dfsg-1) unstable; urgency=medium
 .
   [ Andreas Tille ]
   * Fix Title in upstream metadata
 .
   [ Alexandre Mestiashvili]
   * Initial release. Closes: #787739
   * Use help2man to generate man page, remove manually created manpage
   * d/control: Add python-openbabel, numpy, lxml and pymol to Build-Depends:
   * d/rules: Install man page using help2man, run test
   * d/changelog: New upstream release, merge unreleased changelog entries
   * d/tests/*: Run autopkgtest, other tests require removed pdb files,
     ignore for now
   * d/watch: Add dversionmangle
   * d/copyright: Use Files-Excluded: to remove pdb files due to unclear
     license, remove pdb license and update copyright years
Checksums-Sha1:
 900d90648043f9ee975e45664f3a22522c515b46 2068 plip_1.3.0a+dfsg-1.dsc
 63f1c4c002fce262659e955caff3c1bca14d50f0 53380 plip_1.3.0a+dfsg.orig.tar.xz
 dd4935b43c1a7a7d4997a0118086fc1861892e40 2932 plip_1.3.0a+dfsg-1.debian.tar.xz
 1df40532b8fab001022ff01fe4e2761e05d493d2 44578 plip_1.3.0a+dfsg-1_all.deb
Checksums-Sha256:
 4675f20900235509c36d83c7a2e6841c458881127e72dd9d53f35a35db018557 2068 plip_1.3.0a+dfsg-1.dsc
 65d691d2ad1300db18fbcc79a78654577476282459afe1052ad96708095ec39e 53380 plip_1.3.0a+dfsg.orig.tar.xz
 f75813286d99f92e41258ed8c27acbc7d6d27247fec2539d75f442eee8135c27 2932 plip_1.3.0a+dfsg-1.debian.tar.xz
 2926c133910a1fb84da5e82f6e7fac1c9eb83322833669d94d8aeb52fd72d65e 44578 plip_1.3.0a+dfsg-1_all.deb
Files:
 c601716f8bf0259854285f66537e3b79 2068 python optional plip_1.3.0a+dfsg-1.dsc
 3e7e2d20d67ba75be1991a8e7681a97a 53380 python optional plip_1.3.0a+dfsg.orig.tar.xz
 6caa4be9e189ece1614f9f2c1daed84f 2932 python optional plip_1.3.0a+dfsg-1.debian.tar.xz
 84de98962c36a4c75936903bd2e08dcb 44578 python optional plip_1.3.0a+dfsg-1_all.deb

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--- End Message ---

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