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Bug#777688: marked as done (ITP: khmer -- in-memory DNA sequence kmer counting, filtering & graph traversal)

Your message dated Sat, 19 Dec 2015 19:00:26 +0000
with message-id <E1aAMjy-0007TZ-Nx@franck.debian.org>
and subject line Bug#777688: fixed in khmer 2.0+dfsg-1
has caused the Debian Bug report #777688,
regarding ITP: khmer -- in-memory DNA sequence kmer counting, filtering & graph traversal
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
777688: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=777688
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Owner: Debian Med mailing list <debian-med@lists.debian.org>
Severity: wishlist
X-Debbugs-Cc: debian-med@lists.debian.org


* Package name    : khmer
  Version         : 1.3
  Upstream Author : Michael R. Crusoe & C. Titus Brown <khmer-project@idyll.org>
* URL             : http://khmer.readthedocs.org/
* License         : BSD-3-Clause
  Programming Lang: C++, Python
  Description     : in-memory DNA sequence kmer counting, filtering & graph traversal

 khmer is a library and suite of command line tools for working with DNA
 sequence. It is primarily aimed at short-read sequencing data such as that
 produced by the Illumina platform. khmer takes a k-mer-centric approach to
 sequence analysis, hence the name.

Used by many bioinformatic processing pipelines. Co-maintained by the Debian
Med team; I am also the lead upstream developer.

--- End Message ---
--- Begin Message --- 
Source: khmer
Source-Version: 2.0+dfsg-1

We believe that the bug you reported is fixed in the latest version of
khmer, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 777688@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe <crusoe@ucdavis.edu> (supplier of updated khmer package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Wed, 09 Sep 2015 08:54:11 +0200
Source: khmer
Binary: khmer-common khmer liboxli1 liboxli-dev
Architecture: source amd64
Version: 2.0+dfsg-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <crusoe@ucdavis.edu>
Description:
 khmer      - in-memory DNA sequence kmer counting, filtering & graph traversal
 khmer-common - common files for the khmer project tools
 liboxli-dev - in-memory DNA sequence analysis dev library
 liboxli1   - in-memory DNA sequence analysis library from the khmer project
Closes: 777688
Changes:
 khmer (2.0+dfsg-1) unstable; urgency=low
 .
   * Initial upload (Closes: #777688)
Checksums-Sha1:
 fbdc72bf5d10fe052147494bce6662a2588cc1bc 2408 khmer_2.0+dfsg-1.dsc
 09f19e7345d54a7dc9a2b7413453c383ac3460d6 19288148 khmer_2.0+dfsg.orig.tar.xz
 e43b8e761300931e74d238d373bf55c080316cda 10196 khmer_2.0+dfsg-1.debian.tar.xz
 fd95a34ba0827d825efbbd123fc833de4dd87e61 239858 khmer-common_2.0+dfsg-1_amd64.deb
 0523d10b20e5af55fc6b09bd2adf532db5f57e28 5960502 khmer_2.0+dfsg-1_amd64.deb
 0ca3dd322aa98420de62345aaec243b9ad9bb0c1 275820 liboxli-dev_2.0+dfsg-1_amd64.deb
 b53c3e4922d058d89622885f96c168b669ac8e9d 220942 liboxli1_2.0+dfsg-1_amd64.deb
Checksums-Sha256:
 c40f2dbf118cf3a32ecad0067c9243398959846c126f2543a5d1d15a3d623b73 2408 khmer_2.0+dfsg-1.dsc
 0e408eccd62056c06a49731d029769b292057d0fa9b9758adff5de1c7a332ac0 19288148 khmer_2.0+dfsg.orig.tar.xz
 9c32d5a12e1198b1bbe4c172d8359c5e9cef263147b91c2478486bb766c35075 10196 khmer_2.0+dfsg-1.debian.tar.xz
 40411fd9436c3fb085d2771dc7c941be17c55c26c48c7a632a9602ba02995419 239858 khmer-common_2.0+dfsg-1_amd64.deb
 b6a85110e8a6af8ee6233d674f3177db9c97bf28afed3e17c2f471ff2bad92fd 5960502 khmer_2.0+dfsg-1_amd64.deb
 583a5917fe17cc51bca5dad98b97daff4fce211bbc1e8dec06a188ed48ebc07e 275820 liboxli-dev_2.0+dfsg-1_amd64.deb
 0054159222476ce93827872daef444e7db25e4831264c0f7488839bf38e6f3b6 220942 liboxli1_2.0+dfsg-1_amd64.deb
Files:
 d0aa7edbe875e401d734209c30e70936 2408 science optional khmer_2.0+dfsg-1.dsc
 3684c790194ed57d85404e81bee52cb1 19288148 science optional khmer_2.0+dfsg.orig.tar.xz
 6737b6e50ddb137f277f12d545366d64 10196 science optional khmer_2.0+dfsg-1.debian.tar.xz
 0e7a07a7477c29b10a61ca3a93b9491a 239858 science optional khmer-common_2.0+dfsg-1_amd64.deb
 48b36e1ffe7a4ac96ac00d87ec005acd 5960502 python optional khmer_2.0+dfsg-1_amd64.deb
 16197c6f3b9024fba27926c9b32fbeb3 275820 libdevel optional liboxli-dev_2.0+dfsg-1_amd64.deb
 e1cd63c0ad3702eeba8fe29651464012 220942 libs optional liboxli1_2.0+dfsg-1_amd64.deb

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--- End Message ---
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