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Bug#771154: marked as done (ITP: plink1.9 -- whole-genome association analysis toolset)

Your message dated Mon, 29 Jun 2015 16:01:38 +0000
with message-id <E1Z9bV4-0003uF-Ig@franck.debian.org>
and subject line Bug#771154: fixed in plink1.9 1.90~b3b-150117-1
has caused the Debian Bug report #771154,
regarding ITP: plink1.9 -- whole-genome association analysis toolset
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
771154: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=771154
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: plink
Severity: wishlist

Dear Maintainer,
Plink2 [1] was just presented at the annual meeting of the American Society of
Human Genetics 2014 [2]. Plink2 is a comprehensive update of plink with new
algorithms and new methods, faster and less memory consumer than the first
plink. As it was not totally compatible with first plink [1], I propose to
create a new package to permit the cohabitation of these two versions (like for
bowtie and bowtie2). If you agree, I will submit it [3] on Alioth.

Best regards,
Dylan

[1] https://www.cog-genomics.org/plink2/
[2] https://www.cog-genomics.org/static/pdf/plink2-ashg.pdf
[3] https://bitbucket.org/Dybian/package-debian-plink2



-- System Information:
Debian Release: 7.7
  APT prefers stable-updates
  APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)

Kernel: Linux 3.2.0-4-amd64 (SMP w/2 CPU cores)
Locale: LANG=fr_FR.utf8, LC_CTYPE=fr_FR.utf8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash

--- End Message ---
--- Begin Message --- 
Source: plink1.9
Source-Version: 1.90~b3b-150117-1

We believe that the bug you reported is fixed in the latest version of
plink1.9, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 771154@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Dylan Aïssi <bob.dybian@gmail.com> (supplier of updated plink1.9 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Thu, 27 Nov 2014 07:54:15 +0100
Source: plink1.9
Binary: plink1.9
Architecture: source amd64
Version: 1.90~b3b-150117-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Dylan Aïssi <bob.dybian@gmail.com>
Description:
 plink1.9   - whole-genome association analysis toolset
Closes: 771154
Changes:
 plink1.9 (1.90~b3b-150117-1) unstable; urgency=low
 .
   * New upstream release, rewrite of plink (Closes: #771154)
   * Import debian/* from plink 1.07-3
   * Updated debian/* for plink1.9
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 c5c6170f345f1deed599ad1595484d4c700f0de0 7748 plink1.9_1.90~b3b-150117-1.debian.tar.xz
 d1c107a4590ebfe565a2c7702a718e6b4a85f583 782106 plink1.9_1.90~b3b-150117-1_amd64.deb
Checksums-Sha256:
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Files:
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 e7525d9730f62d30b983cba5fdeac10d 668236 science optional plink1.9_1.90~b3b-150117.orig.tar.xz
 5a9920a9cea065f74a942dedcd053f10 7748 science optional plink1.9_1.90~b3b-150117-1.debian.tar.xz
 2594b2e402b088db389d817f0bd98c28 782106 science optional plink1.9_1.90~b3b-150117-1_amd64.deb

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--- End Message ---
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