Bug#782697: marked as done (ITP: murasaki -- homology detection tool across multiple large genomes)
Your message dated Mon, 22 Jun 2015 10:00:25 +0000
with message-id <E1Z6yWf-0000ge-IS@franck.debian.org>
and subject line Bug#782697: fixed in murasaki 1.68.6-1
has caused the Debian Bug report #782697,
regarding ITP: murasaki -- homology detection tool across multiple large genomes
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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782697: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=782697
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--- Begin Message ---
- To: Debian Bug Tracking System <submit@bugs.debian.org>
- Subject: ITP: murasaki -- homology detection tool across multiple large genomes
- From: Andreas Tille <tille@debian.org>
- Date: Thu, 16 Apr 2015 13:37:57 +0200
- Message-id: <20150416113757.7975.72420.reportbug@mail.an3as.eu>
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : murasaki
Version : 1.68.6
Upstream Author : Kris Popendorf <comp@bio.keio.ac.jp>
* URL : http://murasaki.dna.bio.keio.ac.jp/wiki/
* License : GPL
Programming Lang: C++, Perl
Description : homology detection tool across multiple large genomes
Murasaki is a scalable and fast, language theory-based homology
detection tool across multiple large genomes. It enable whole-genome
scale multiple genome global alignments. Supports unlimited length
gapped-seed patterns and unique TF-IDF based filtering.
.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with
40 nodes: 52 wall minutes))
* scalable (Arbitrarily parallelizable across multiple nodes using MPI.
Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
* unlimited pattern length
* repeat tolerant
* intelligent noise reduction
The package will be maintained by the Debian Med team at
Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/murasaki/trunk/
--- End Message ---
--- Begin Message ---
Source: murasaki
Source-Version: 1.68.6-1
We believe that the bug you reported is fixed in the latest version of
murasaki, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 782697@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated murasaki package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 16 Apr 2015 08:51:12 +0200
Source: murasaki
Binary: murasaki murasaki-mpi murasaki-common
Architecture: source amd64 all
Version: 1.68.6-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
murasaki - homology detection tool across multiple large genomes
murasaki-common - homology detection tool across multiple large genomes (common fil
murasaki-mpi - homology detection tool across multiple large genomes (MPI-versio
Closes: 782697
Changes:
murasaki (1.68.6-1) unstable; urgency=medium
.
* Initial release (Closes: #782697)
* Split up into murasaki and murasaki-mpi (+murasaki-common)
Checksums-Sha1:
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Files:
6df44dd71b15e28bb216000d6d8c3b91 2244 science optional murasaki_1.68.6-1.dsc
25477c77aa21246d4a639527836e6c77 307745 science optional murasaki_1.68.6.orig.tar.gz
0ecf49c047952369b7abc6ba86e0c340 5680 science optional murasaki_1.68.6-1.debian.tar.xz
5fdf274c0c153129b29e7707bd2f79f2 466164 science optional murasaki_1.68.6-1_amd64.deb
cb4bfe677bbe37131b8704b330fde1f8 555568 science optional murasaki-mpi_1.68.6-1_amd64.deb
3cbef1fac8da962a5fae458315a8c298 143246 science optional murasaki-common_1.68.6-1_all.deb
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