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Bug#776709: marked as done (ITP: toppred -- transmembrane topology prediction)

Your message dated Fri, 22 May 2015 22:00:34 +0000
with message-id <E1Yvuza-0004GC-5C@franck.debian.org>
and subject line Bug#776709: fixed in toppred 1.10-1
has caused the Debian Bug report #776709,
regarding ITP: toppred -- transmembrane topology prediction
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
776709: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=776709
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>

* Package name    : toppred
  Version         : 1.10
  Upstream Author : Eric Deveaud <edeveaud@pasteur.fr>
* URL             : https://github.com/bioinfo-center-pasteur-fr/toppred
* License         : GPL
  Programming Lang: C
  Description     : transmembrane topology prediction
 Toppred is a program to determine the topology of a transmembrane
 protein based on G. von Heijne algorithm.
 .
 Each sequence from seq data in fasta format is processed, and toppred
 generate the Hydrophobycity profile of the sequence, and the
 corresponding hydrophobycities values in the file sequence-ID.hydro.
 .
 Furthermore, the predicted topologies are represented as png images.
 Each topology is stored in file sequence-ID-number.png
 .
 The hydrophobicity profile is computed using a window formed by a core
 rectangular window of size n, flanked by 2 triangular windows of size q.
 NB rectangular and triangular mean that the ponderation values inside
 those windows are respectively constant and variable.
 .
 This program is a new implementation of the original toppred program,
 based on G. von Heijne algorithm


This package is maintained in the Debian Med team and was created
as demonstration in the Debian Med sprint.  The VCS URL is
   git://anonscm.debian.org/debian-med/toppred.git

--- End Message ---
--- Begin Message --- 
Source: toppred
Source-Version: 1.10-1

We believe that the bug you reported is fixed in the latest version of
toppred, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 776709@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated toppred package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Sat, 31 Jan 2015 12:59:46 +0100
Source: toppred
Binary: toppred
Architecture: source amd64
Version: 1.10-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 toppred    - transmembrane topology prediction
Closes: 776709
Changes:
 toppred (1.10-1) unstable; urgency=low
 .
   * Initial release (Closes: #776709)
Checksums-Sha1:
 434029931789c4f99931e8ebd690337ad93f2718 1963 toppred_1.10-1.dsc
 2e1fc7a81ca200b43ac472ab78157a208551cc08 158704 toppred_1.10.orig.tar.gz
 c1b85c29b387b32db2bb426da22b04649bb9deb0 2344 toppred_1.10-1.debian.tar.xz
 928cbd5026e4ba8918c2392601e7ca2b70d616f7 61814 toppred_1.10-1_amd64.deb
Checksums-Sha256:
 d575d8721faddeb0093131afc0e7e1f0265c282c667e446a0eb8f69508fba1a8 1963 toppred_1.10-1.dsc
 3593666a4ae65b752e8d7945dc9ce1b8d21d888190f9917c31c48335157394b3 158704 toppred_1.10.orig.tar.gz
 8b00e3fd051b928d1fa6cfd04f925ef4afd58cda05a14a6fc6b6ddd1ac9ef432 2344 toppred_1.10-1.debian.tar.xz
 f93bca443c2446bf083f4915cbef14c4ee2b145650b53b7757d3c906f299c6c5 61814 toppred_1.10-1_amd64.deb
Files:
 57c8c1fb98e98a8e73d937ea1909a698 1963 science optional toppred_1.10-1.dsc
 68678e757c2ebe29e1fa852d874c4dff 158704 science optional toppred_1.10.orig.tar.gz
 c4df4ea595e72f67ee54d0fc60a0e009 2344 science optional toppred_1.10-1.debian.tar.xz
 98e3f84b27a845550dbfd11a93fabafd 61814 science optional toppred_1.10-1_amd64.deb

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