Bug#745847: marked as done (ITP: perm -- efficient mapping of short reads with periodic spaced seeds)
Your message dated Wed, 30 Apr 2014 16:00:07 +0000
with message-id <E1WfWvX-0007Pd-Rv@franck.debian.org>
and subject line Bug#745847: fixed in perm 0.4.0-1
has caused the Debian Bug report #745847,
regarding ITP: perm -- efficient mapping of short reads with periodic spaced seeds
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
745847: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=745847
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : perm
Version : 0.4.0
Upstream Author : Yangho Chen <yanghoch@usc.edu>
* URL : http://code.google.com/p/perm/
* License : Apache 2.0
Programming Lang: C++
Description : efficient mapping of short reads with periodic spaced seeds
PerM is a software package which was designed to perform highly efficient
genome scale alignments for hundreds of millions of short reads produced by
the ABI SOLiD and Illumina sequencing platforms. Today PerM is capable of
providing full sensitivity for alignments within 4 mismatches for 50bp SOLID
reads and 9 mismatches for 100bp Illumina reads.
This package was prepared by the BioLinux team and taken over into Debian Med
team maintenance at
Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/perm/trunk/
--- End Message ---
--- Begin Message ---
Source: perm
Source-Version: 0.4.0-1
We believe that the bug you reported is fixed in the latest version of
perm, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 745847@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated perm package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 25 Apr 2014 18:39:38 +0200
Source: perm
Binary: perm
Architecture: source amd64
Version: 0.4.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
perm - efficient mapping of short reads with periodic spaced seeds
Closes: 745847
Changes:
perm (0.4.0-1) unstable; urgency=medium
.
* Initial upload to Debian (Closes: #745847)
Checksums-Sha1:
ab30b5d369447c846af0a4f1833583ac3265c413 1962 perm_0.4.0-1.dsc
b89025fe3ac6d6ab48c7a8a898a592119eb62037 114025 perm_0.4.0.orig.tar.gz
b1593adee14fbc017d7c082d7fda7a7eac431c27 8980 perm_0.4.0-1.debian.tar.xz
bce64a12e87cc37dd9a9b888a917ba964df9247b 114398 perm_0.4.0-1_amd64.deb
Checksums-Sha256:
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31384ffe5abc1eabd68d6d5a331da761891a99da9e8502b1db8f0178e5df6b18 114025 perm_0.4.0.orig.tar.gz
d94041fe61c81c3e2db8a62d014f8f2536ec8c48379602a54008cd45190b0ec1 8980 perm_0.4.0-1.debian.tar.xz
0389e69f2b975c56af70e61927c6e5c0cd9346f6a2ebf4a708cf03ac260165bb 114398 perm_0.4.0-1_amd64.deb
Files:
1ae6d13fdf09886fc82ed64aefa60482 114398 science optional perm_0.4.0-1_amd64.deb
bdeae191240ae9b97ca32fb4b2a3e50c 1962 science optional perm_0.4.0-1.dsc
302f5828a0f15b7ae4c85390e8fe747d 114025 science optional perm_0.4.0.orig.tar.gz
6b1e15b5e50f3d8846648b27a4990567 8980 science optional perm_0.4.0-1.debian.tar.xz
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--- End Message ---
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