Bug#724280: marked as done (ITP: rtax -- Rapid and accurate taxonomic classification of short paired-end sequence reads from the 16S ribosomal RNA gene)
Your message dated Sun, 29 Dec 2013 11:00:07 +0000
with message-id <E1VxE6J-0000TD-Oy@franck.debian.org>
and subject line Bug#724280: fixed in rtax 0.984-1
has caused the Debian Bug report #724280,
regarding ITP: rtax -- Rapid and accurate taxonomic classification of short paired-end sequence reads from the 16S ribosomal RNA gene
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
724280: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=724280
Debian Bug Tracking System
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--- Begin Message ---
- To: Debian Bug Tracking System <submit@bugs.debian.org>
- Subject: ITP: rtax -- Rapid and accurate taxonomic classification of short paired-end sequence reads from the 16S ribosomal RNA gene
- From: Simon Kainz <simon@familiekainz.at>
- Date: Mon, 23 Sep 2013 11:56:03 +0200
- Message-id: <20130923095603.26061.18627.reportbug@zidpc9027.tu-graz.ac.at>
Package: wnpp
Severity: wishlist
Owner: Simon Kainz <simon@familiekainz.at>
* Package name : rtax
Version : 0.983
Upstream Author : David A. W. Soergel <David A. W. Soergel>
* URL : David A. W. Soergel
* License : BSD
Programming Lang: Perl
Description : Rapid and accurate taxonomic classification of short
paired-end sequence reads from the 16S ribosomal RNA gene
Short-read technologies for microbial community profiling are increasingly
popular, yet previous techniques for assigning taxonomy to paired-end reads
perform poorly. RTAX provides rapid taxonomic assignments of paired-end reads
using a consensus algorithm.
This tool is an optional dependency for qiime(which is already packaged) and it
would be great to have it
packaged for Debian.
Regards,
Simon
--- End Message ---
--- Begin Message ---
Source: rtax
Source-Version: 0.984-1
We believe that the bug you reported is fixed in the latest version of
rtax, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 724280@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Simon Kainz <simon@familiekainz.at> (supplier of updated rtax package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Wed, 27 Nov 2013 09:50:23 +0100
Source: rtax
Binary: rtax
Architecture: source all
Version: 0.984-1
Distribution: unstable
Urgency: low
Maintainer: Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Simon Kainz <simon@familiekainz.at>
Description:
rtax - Classification of sequence reads of 16S ribosomal RNA gene
Closes: 724280
Changes:
rtax (0.984-1) unstable; urgency=low
.
* Initial release. (Closes: #724280)
* Removed broken magic to find scripts-subdir,
because we know where rtax is installed (set_script_dir.path)
* Change interpreter to bash to prevent syntax
error warnings (fix-bash-syntax-error.patch)
* Added minimal manpage.
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--- End Message ---
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