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Bug#627391: marked as done (RFP: prank -- The Probabilistic Alignment Kit for biological sequences)

Your message dated Sat, 30 Nov 2013 00:00:24 +0000
with message-id <E1VmXyy-0005PA-7U@franck.debian.org>
and subject line Bug#627391: fixed in prank 0.0.130820-1
has caused the Debian Bug report #627391,
regarding RFP: prank -- The Probabilistic Alignment Kit for biological sequences
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
627391: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=627391
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Manuel Prinz <manuel@debian.org>


* Package name    : prank
  Version         : 100802
  Upstream Author : Ari Loytynoja
* URL             : http://www.ebi.ac.uk/goldman-srv/prank/src/prank/
* License         : GPL2+
  Programming Lang: C++
  Description     : Probabilistic Alignment Kit for biological sequences

 PRANK is a probabilistic multiple alignment program for DNA, codon and
 amino-acid sequences. It's based on a novel algorithm that treats insertions
 correctly and avoids over-estimation of the number of deletion events.
 .
 In addition, PRANK borrows ideas from maximum likelihood methods used in
 phylogenetics and correctly takes into account the evolutionary distances
 between sequences. Lastly, PRANK allows for defining a potential structure
 for sequences to be aligned and then, simultaneously with the alignment,
 predicts the locations of structural units in the sequences.

The package was prepared during the Debian Med meeting in Travemünde and is
mostly ready for uploading to the archive.

--- End Message ---
--- Begin Message --- 
Source: prank
Source-Version: 0.0.130820-1

We believe that the bug you reported is fixed in the latest version of
prank, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 627391@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated prank package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Wed, 13 Nov 2013 14:29:31 +0100
Source: prank
Binary: prank
Architecture: source amd64
Version: 0.0.130820-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description: 
 prank      - Probabilistic Alignment Kit for DNA, codon and amino-acid sequenc
Closes: 627391
Changes: 
 prank (0.0.130820-1) unstable; urgency=low
 .
   * Initial upload to Debian (Closes: #627391)
Checksums-Sha1: 
 1a1aef751ad0648300ab2b9c2c9d8c639e987b41 1351 prank_0.0.130820-1.dsc
 cae3ddce89f8b15e1df1282ba9c40ec36c925f29 151016 prank_0.0.130820.orig.tar.gz
 419f8115a8e2b73fa3a7a00763a0b0ff910aed7d 3021 prank_0.0.130820-1.debian.tar.gz
 0fe0d03312a2c54164e2372481ffe2ea4c95f786 326752 prank_0.0.130820-1_amd64.deb
Checksums-Sha256: 
 4b45a4ef37d3ea030be83648084ed28d5538b8535f264b3bb250e6d9aebd2ccc 1351 prank_0.0.130820-1.dsc
 460b48c299ba524e08f0fa9f4cb1c316db682602006d97a19782b1e8f2c72572 151016 prank_0.0.130820.orig.tar.gz
 aa932a8bafeb3328058060c4139c82c254219364e0b68be800aa81be41fa7eef 3021 prank_0.0.130820-1.debian.tar.gz
 a3c2267f639dd5d006bc03e95acccfe17312bdef6c8a56986b0448d1711c5ae4 326752 prank_0.0.130820-1_amd64.deb
Files: 
 5d7ca89dd62a5dde490733726b00d79e 1351 science optional prank_0.0.130820-1.dsc
 5943a1d2ee6b19f3f0176b739a7eadb8 151016 science optional prank_0.0.130820.orig.tar.gz
 d7a538954f66b15e5181004c5387dcc9 3021 science optional prank_0.0.130820-1.debian.tar.gz
 00d5ed8cc2133fd54b82690059e669c2 326752 science optional prank_0.0.130820-1_amd64.deb

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--- End Message ---
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