Bug#724280: ITP: rtax -- Rapid and accurate taxonomic classification of short paired-end sequence reads from the 16S ribosomal RNA gene
Hi Simon,
this package is a perfect target for Debian Med but I noticed you are
not yet a member of the Alioth team. Since I'm currently on vaccation
and not frequently online I just added skainz-guest to the Debian Med
team simply assuming you might consider using Debian Med VCS as
described in our team policy[1]. I hope you agree with this and please
let us know if you need any help with the packaging.
Kind regards
Andreas.
[1] http://debian-med.alioth.debian.org/docs/policy.html
On Mon, Sep 23, 2013 at 11:56:03AM +0200, Simon Kainz wrote:
> Package: wnpp
> Severity: wishlist
> Owner: Simon Kainz <simon@familiekainz.at>
>
> * Package name : rtax
> Version : 0.983
> Upstream Author : David A. W. Soergel <David A. W. Soergel>
> * URL : David A. W. Soergel
> * License : BSD
> Programming Lang: Perl
> Description : Rapid and accurate taxonomic classification of short
> paired-end sequence reads from the 16S ribosomal RNA gene
>
> Short-read technologies for microbial community profiling are increasingly
> popular, yet previous techniques for assigning taxonomy to paired-end reads
> perform poorly. RTAX provides rapid taxonomic assignments of paired-end reads
> using a consensus algorithm.
>
> This tool is an optional dependency for qiime(which is already packaged) and it
> would be great to have it
> packaged for Debian.
>
> Regards,
>
> Simon
>
>
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> Archive: [🔎] 20130923095603.26061.18627.reportbug@zidpc9027.tu-graz.ac.at">http://lists.debian.org/[🔎] 20130923095603.26061.18627.reportbug@zidpc9027.tu-graz.ac.at
>
>
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