Bug#692238: ITP: ray -- Parallel genome assemblies for parallel DNA sequencing
Package: wnpp
Severity: wishlist
Owner: "Sébastien Boisvert" <sebastien.boisvert.3@ulaval.ca>
* Package name : ray
Version : 2.1.0
Upstream Author : Sébastien Boisvert <sebastien.boisvert.3@ulaval.ca>
* URL : http://denovoassembler.sourceforge.net
* License : GPLv3 (Ray plugins) and LGPLv3 (RayPlatform)
Programming Lang: C++
Description : Parallel genome assemblies for parallel DNA sequencing
Ray is a parallel software that computes de novo genome assemblies with
next-generation sequencing data.
Ray is written in C++ and can run in parallel on numerous interconnected
computers using the message-passing interface (MPI) standard.
Included:
- Ray de novo assembly of single genomes
- Ray Méta de novo assembly of metagenomes
- Ray Communities microbe abundance + taxonomic profiling
- Ray Ontologies gene ontology profiling
Debian git repository:
http://anonscm.debian.org/gitweb/?p=debian-med/ray.git
Thread on debian-med@lists.debian.org:
"Packaging Ray for Debian Med"
http://lists.debian.org/debian-med/2012/11/msg00006.html
The packaging was reviewed by Andreas Tille and Timothy Booth.
Thanks !
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