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Bug#680233: marked as done (ITP: lowcompseg -- identification and masking of segments of low compositional complexity in amino acid sequences)

Your message dated Tue, 14 Aug 2012 14:00:10 +0000
with message-id <E1T1HfG-0007vA-T4@franck.debian.org>
and subject line Bug#680233: fixed in ncbi-seg 0.0.20000620-1
has caused the Debian Bug report #680233,
regarding ITP: lowcompseg -- identification and masking of segments of low compositional complexity in amino acid sequences
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
680233: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=680233
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: lkajan@rostlab.org


* Package name    : seg
  Version         : 1994101801
  Upstream Author : John Wootton <wootton@ncbi.nlm.nih.gov> and Scott Federhen <federhen@ncbi.nlm.nih.gov>
* URL             : ftp://ftp.ncbi.nih.gov/pub/seg/seg/README
* License         : In public domain
  Programming Lang: C
  Description     : identification and masking of segments of low compositional complexity in amino acid sequences

SEG is a program for identifying and masking segments of low compositional complexity in amino acid sequences.
.
seg divides sequences into contrasting segments of low-complexity and high-complexity.  Low-complexity segments defined by the
algorithm represent "simple sequences" or "compositionally-biased regions".
.
This program is inappropriate for masking nucleotide sequences and, in fact, may strip some nucleotide ambiguity codes from nt. sequences as they are being read.

--- End Message ---
--- Begin Message --- 
Source: ncbi-seg
Source-Version: 0.0.20000620-1

We believe that the bug you reported is fixed in the latest version of
ncbi-seg, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 680233@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Laszlo Kajan <lkajan@rostlab.org> (supplier of updated ncbi-seg package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


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Hash: SHA1

Format: 1.8
Date: Wed, 04 Jul 2012 16:11:12 +0000
Source: ncbi-seg
Binary: ncbi-seg ncbi-seg-dbg
Architecture: source amd64
Version: 0.0.20000620-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Laszlo Kajan <lkajan@rostlab.org>
Description: 
 ncbi-seg   - tool to mask segments of low compositional complexity in amino ac
 ncbi-seg-dbg - debug symbols for ncbi-seg
Closes: 680233
Changes: 
 ncbi-seg (0.0.20000620-1) unstable; urgency=low
 .
   * Initial version. (Closes: #680233)
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Files: 
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